Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1447 ATGGGTTGCATGTGTTGCAAGCCTTCTGCAATCGAGGATAGTAAGGATAGTCCGAGGGAGCGATTATCGAACAAGTCTGTGCTCGACTCGCGTGTGTCTAGAGGAGCTTCGTCGAGGAGGGAGGAAGTGTATAGGGTGAAGGATAGAAGTGATAATAACAATGATGCAAGAACGGCGTTGATTGATAAGCATGGACAAGGGAATGGTTCAGTTAGAGTTCATGGTGATAATTTTGAAAGGAAGAGGGAGAAAATGGAATATGTTATTGCTCAACATCCGGGGATTGGTAGTGTTCCGAAGGCTATGGAAGGGGAACATGTTGCGGCTGGATGGCCGTCATGGCTGGCTGCAGTTGCTGGTGAAGCAATCAAGGGATGGCTGCCACGACGCGCAGATTCTTTTGAGAAGTTGGATAAAATTGGCCAGGGAACTTATAGTAATGTTTATAGAGCTCGTGATCTTGAACAAAGAAAGATTGTTGCTTTGAAAAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTTCGTTTCATGGCAAGGGAAATTCACATTCTTCGTAGGCTTGATCATCCAAATGTCATAAAACTGGAAGGCTTGGTTACATCAAGGATGTCGTGCAGCTTATACCTTGTTTTTGAATACATGGAGCATGACTTGGCCGGGCTTGCATCACATCCTGGACTGAAGTTTACAGAATCACAGGTTAAATGTTACATGCAGCAACTTCTACGTGGACTTGATCACTGCCATAGCCGTGGTGTGCTGCACCGTGACATTAAGGGTTCCAATCTTTTGATTGATAACAATGGAGTATTGAAAATTGCAGACTTTGGTTTGGCGAGCTTTTTTGATCCCAATCTAAATCAGCCACTAACAAGCCGAGTTGTCACACTTTGGTATAGGCCACCTGAACTTTTACTCGGAGCTACTTACTATGGCACTGCTGTAGATTTATGGAGTACAGGTTGCATACTTGCTGAGCTGTATGCTGGCAAGCCTATAATGCCTGGTAGAACTGAGGTGGAGCAATTACATAAAATTTTTAAACTTTGTGGTTCGCCTTCCGAGGATTATTGGAGAAAATCAAAATTGCCTCATGCAACGATATTTAAGCCTCAACAACCCTATAGGCGTTGTGTTGCTGAGACATTCAAGGAATTTCCTGCACCTACAATAGAACTGATAGAGACACTTTTGTCCATAGACCCTGCAGATCGTGGAACTTCAGCATCTGCTTTGATGAGTGAGTTCTTCTCAACAAAGCCTCTACCTTGTGATCCTTCAAGCTTGCCAAAGTATCCTCCTAGCAAAGAATTTGATGCTAAAGTACGCGATGAAGAAGCTAGAAGACAAGGGGCAGCAGGAAGTAAGGGTCAGAAACATGATCCTGAGAGAAGAGGAGTACGAGAATCACGAGCTATTCCTGCACCTGATGCCAATGCTGAACTGGTCGTGTCAATGCAGAAGAGACAAGGTCAGAACCATTCTCAAAGTAGAAGTGAGAAGTTTAACCCTCATCCTGAAGATGCTGGTTCTGGTTTTCCCATTGAACCCCCTAGACCATCACAAGCTGCAGAAGCAAGCGTGGATCCCCAGGCAAATCAACATAAAAGAGCCTCTCATTCAGGTCCTCTGACTCACCGTGCTGCATGGGCGAAAGCTGGGAAGAACCAAGACGATGCTGCAAAGATTTCAATGGGCGGAGACCTGTCTACTATGTCAGGCTTAGTTGCAGCTAGGAGGAGTATGCTGTCTGACGATCGCAGAGAAAGTTCTGGATCATCACAAGTTGAGCCTCCGAAACTAATCACTAGGTTCCCAGGTTCCTTCAAGGAGGCATCTGAATCATTAATGCAACAAAATCAAAATCAGAAGCATCATGTACATGCTTCTCAAAAGGAAGATGCAAAAGGCAGCAACAAAGACCCAAATAATGTTGGTTATGGATCTAAGGGTTATAAAATTCATTATTCCGGTCCATTGCTTGTTCCCTCAAGCAACATGGATCAGATGTTGAAAGACCATGACCGCCAAATTCAAGAAGCGGTCAGAAGAGCACGTCTAGACAAGGCAAAAATGCGAAGACTTCAAGCTGAAGGGAACCAGAAAAATAATTCATTATTTGTTTCTGGTCGTTGA 2139 0.4423 MGCMCCKPSAIEDSKDSPRERLSNKSVLDSRVSRGASSRREEVYRVKDRSDNNNDARTALIDKHGQGNGSVRVHGDNFERKREKMEYVIAQHPGIGSVPKAMEGEHVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQRKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTESQVKCYMQQLLRGLDHCHSRGVLHRDIKGSNLLIDNNGVLKIADFGLASFFDPNLNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVAETFKEFPAPTIELIETLLSIDPADRGTSASALMSEFFSTKPLPCDPSSLPKYPPSKEFDAKVRDEEARRQGAAGSKGQKHDPERRGVRESRAIPAPDANAELVVSMQKRQGQNHSQSRSEKFNPHPEDAGSGFPIEPPRPSQAAEASVDPQANQHKRASHSGPLTHRAAWAKAGKNQDDAAKISMGGDLSTMSGLVAARRSMLSDDRRESSGSSQVEPPKLITRFPGSFKEASESLMQQNQNQKHHVHASQKEDAKGSNKDPNNVGYGSKGYKIHYSGPLLVPSSNMDQMLKDHDRQIQEAVRRARLDKAKMRRLQAEGNQKNNSLFVSGR* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1447 712 MobiDBLite consensus disorder prediction 12 27 - -
Mal4g1447 712 PANTHER CELL DIVISION PROTEIN KINASE 1 694 - -
Mal4g1447 712 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Mal4g1447 712 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1447 712 MobiDBLite consensus disorder prediction 424 651 - -
Mal4g1447 712 MobiDBLite consensus disorder prediction 34 55 - -
Mal4g1447 712 CDD STKc_CDK9_like 134 418 - -
Mal4g1447 712 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1447 712 Gene3D Transferase(Phosphotransferase) domain 1 217 457 - -
Mal4g1447 712 SUPERFAMILY Protein kinase-like (PK-like) 128 426 IPR011009 -
Mal4g1447 712 Coils Coil 679 699 - -
Mal4g1447 712 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Mal4g1447 712 MobiDBLite consensus disorder prediction 437 472 - -
Mal4g1447 712 MobiDBLite consensus disorder prediction 486 500 - -
Mal4g1447 712 MobiDBLite consensus disorder prediction 7 55 - -
Mal4g1447 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Mal4g1447 712 Pfam Protein kinase domain 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1447 712 PANTHER CYCLIN-DEPENDENT KINASE 1 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1447 Mal-Chr4 21656741 21661832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1447 126 460 Core Cell Cycle Gene Families AT5G10270 53.276 1.61e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mal4g1447 Pkinase 3.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1447 - - gmx:100792173 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1447 4 21656741 21661832 Mal4g1447 4 21656741 21661832 ECH