Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1410 ATGATTCTGTTACCTTGTGATAGAGTTTATCAGATTCAGATCTATCTTCTGCACCAGGATTTCAAAGAGGGAATGAAGCTTACCAGTGAACCTAGTCCAAATAACTTGACCTATGTTCTTGAGATTAAATCTGGTAATGTTATTCTTTCAGCTGGTTTCAAAACTTCACAGACTTATTGGACTATGCAGAAGGATATCCGTAAAATTGTTAACAAGAACGGCGATATTGTGGCTTTTGCAAATCTCAGTGACAATTCTTGGAGGTTCTATGATAACAATAAGTCTTTGTTATGGCAATTCATTTTCTCCGGTATAAATGCAAGTTGGATTGCAGTTTTGGGCAAAGACGGTGTCATTACTTTCTCTAATCTCAACGGTGGTGGATCAAATGGTGATGCTGCAATAAGAATACCAAGAGATCCTTGTGGTACACCAGTACCTTGTAATCCCTACAGAGTATGTGCAAACAACCGTATGTGTAGCTGTCCTCTTGTTCTTCTTCCTAGTTGTGAACCGGGTTTTGCCTCTCCTTGTGATGACAAATCAAAAAGATCTGTTGAATTTCTGAAAGTTGATGATGGACTTGGTTACTTTGCGCTTGATTTTCTTCATCCCTATTCGAATACTAATTTATCCAGTTGTCTAACATCTTGCCGTGAAAATTGTTCTTGTCTTGCAATGTTCTTCCATACAAGTTCAGGGAACTGTTTCTTGTTGGACAGTGTTGGAAGTTTTCAGAAATCTGATGATGCTGATTCTGGTTATGTTTCTTACATTAAGGTCGCACGTGATGGAGGTCGAAGAAGCAATAAGCATATCATAGTTGTTGTGATCGTTGTCATATTAACTTTTCTTATTCTGCTCTTTATGGGGGTTCTATACTATAAGAAAAAGAAAAAGTTACCTCGAGAGAATTCAGATGAAGACAATTTCTTGGAGAATTTAACCGGTATGCCAATCCGTTTCCGCTATAATGATCTTGAAGTTGCGACTAATAACTTCTCTGTGAAGCTTGGTCAAGGAGGTTTTGGATCAGTTTATAAAGGAGTTCTACCTGATGGGACTGAATTAGCTGTGAAGAAGCTAGAAGGTATTGGTCAAGGGAAGAAAGAGTTCAGAGCTGAAGTTAGCATCATTGGAAGCATTCATCACCTTAATTTGGTAAGGCTTAAAGGATTTTGTGCAGATGGAACTCATAGACTTTTAGTTTATGAGTATATGGCTAATAACTCATTGGATAAATGGATATTCAAGAAGAAAAAAAGTGAATTTCTTTTGGATTGGGATACAAGGTTTAATATAGCATTAGGAACAGCAAAAGGACTTGCTTATCTGCATCAAGAGTGTGACTCAAAGATTGTTCATTGTGACATCAAACCTGAAAATGTACTTCTAGATGAAAATTTCATAGCCAAAGTTTCAGATTTTGGTTTAGCCAAGCTTATGAATAGAGAACAAAGCCATGTTTTTACAACACTAAGAGGAACTCGTGGCTACCTTGCACCTGAGTGGATAACAAACTATGCTATATCAGAGAAAAGTGATGTATACAGCTATGGAATGGTGTTGCTAGAGATAATTGGAGGAAGGAAGAATTATGATCCTAATGAGACATCAGAGAAATCAAATTTCCCTCGTTTTGCTTTTATGATGATGGAAGAAGGTAAAGTGAGAGATATCATTGATTCAGAGTTGAAAATAGATGATGAGAATGATGATAGGGTTCATTGTGTTGTAAGTGTTGCATTGTGGTGTATACAAGAAGACATGTCTATGAGACCTTCCATGACAAAAGTTGTGCAAATGTTAGAGGGTCTTTGTCCTGTTCCTAAACCACCAAAATCCTCCAATGAAGGAGGAGACACATATTCTGATGCTTGTCTATCAGCATTTAGTCTTTCAGGTCCAAGATAG 1914 0.373 MILLPCDRVYQIQIYLLHQDFKEGMKLTSEPSPNNLTYVLEIKSGNVILSAGFKTSQTYWTMQKDIRKIVNKNGDIVAFANLSDNSWRFYDNNKSLLWQFIFSGINASWIAVLGKDGVITFSNLNGGGSNGDAAIRIPRDPCGTPVPCNPYRVCANNRMCSCPLVLLPSCEPGFASPCDDKSKRSVEFLKVDDGLGYFALDFLHPYSNTNLSSCLTSCRENCSCLAMFFHTSSGNCFLLDSVGSFQKSDDADSGYVSYIKVARDGGRRSNKHIIVVVIVVILTFLILLFMGVLYYKKKKKLPRENSDEDNFLENLTGMPIRFRYNDLEVATNNFSVKLGQGGFGSVYKGVLPDGTELAVKKLEGIGQGKKEFRAEVSIIGSIHHLNLVRLKGFCADGTHRLLVYEYMANNSLDKWIFKKKKSEFLLDWDTRFNIALGTAKGLAYLHQECDSKIVHCDIKPENVLLDENFIAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPNETSEKSNFPRFAFMMMEEGKVRDIIDSELKIDDENDDRVHCVVSVALWCIQEDMSMRPSMTKVVQMLEGLCPVPKPPKSSNEGGDTYSDACLSAFSLSGPR* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1410 637 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 15 626 - -
Mal4g1410 637 ProSiteProfiles PAN/Apple domain profile. 178 262 IPR003609 -
Mal4g1410 637 Gene3D Transferase(Phosphotransferase) domain 1 407 614 - -
Mal4g1410 637 ProSitePatterns Protein kinases ATP-binding region signature. 338 361 IPR017441 GO:0005524
Mal4g1410 637 Gene3D Phosphorylase Kinase; domain 1 295 406 - -
Mal4g1410 637 SUPERFAMILY Protein kinase-like (PK-like) 313 604 IPR011009 -
Mal4g1410 637 ProSiteProfiles Protein kinase domain profile. 332 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1410 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Mal4g1410 637 Pfam Protein kinase domain 336 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1410 637 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 15 626 - -
Mal4g1410 637 CDD STKc_IRAK 338 606 - -
Mal4g1410 637 SMART serkin_6 332 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1410 637 CDD PAN_AP_plant 180 262 - -
Mal4g1410 637 SMART ntp_6 183 261 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1410 Mal-Chr4 20829406 20833262 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1410 278 615 Receptor kinase-like Gene Family AT5G20050 47.632 2.16e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal4g1410 Pkinase 8.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1410 - - mtr:MTR_2g080100 974.156