Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1406 ATGGAAAGTACTGATTCATCGACCGGTTCGCAACAACCGAATCTCCCACCTGGATTCCGATTCCACCCTACAGATGAAGAGCTCGTTGTTCATTACCTCAAGAAAAAAGCAGCTTCAGCTCCTTTACCTGTAGCCATCATAGCTGAAGTTGATCTCTACAAATTTGATCCGTGGGAGCTACCAGCTAAGGCAACGTTTGGAGAGCAAGAGTGGTATTTCTTTAGTCCAAGGGACAGGAAGTATCCGAATGGAGCTAGGCCAAACAGAGCTGCAACTTCTGGTTATTGGAAGGCAACTGGTACTGATAAGCCCGTTTTAACTTCTGGAGGAACACAAAAAGTTGGTGTGAAGAAAGCTTTGGTTTTCTATGGTGGAAAACCACCAAGAGGGATCAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAATAAGCCTAATAATAGGCCTCCGGGTTGTGACTTGGGCAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGCTATGCCGAATCTACAAGAAAAGCAACACACATAGGTCACCGGTGGAACATGATAGGGAAGATTCATTGGATGATATGATAGGAGGAGTACCTCCATCAATCAACGTGGGTCAAATGAATGCTGCAACAAGGTTTCATCATTTTTCAAAGATGTCATCAAATAGTTACAACAATGCATTGTTGGAAAATGACCATAACTTATTAGAAGGAATGATGATCAATAACAATTTAGGAGGTTCAAATTCAAAGGCAGAATTATCTTTTGTGCCAACTATGACAACATCTTCAAATGCTAATTCACCTTCCAAAAGAACACTCTCTTCACTTTATAATTGGAATGATGAAGATGTTGGAGCTCAAGTTGGTACTTCATCATCTACCAAAAGGTTCAATTTGGAAAGTGTTGTGAGGAATGATCAAGAGAGTGGAACTGTTGCTACTTCTTTTGCTTCTCTTCTTAATAATCTCCCTCAAACACCTTCATTACATCAACAACAAACAATGTTGGGATCAATACCATATCCAATTCAAGGGATGAATTGGTATGGTTAA 1059 0.4032 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPVEHDREDSLDDMIGGVPPSINVGQMNAATRFHHFSKMSSNSYNNALLENDHNLLEGMMINNNLGGSNSKAELSFVPTMTTSSNANSPSKRTLSSLYNWNDEDVGAQVGTSSSTKRFNLESVVRNDQESGTVATSFASLLNNLPQTPSLHQQQTMLGSIPYPIQGMNWYG* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1406 352 PANTHER NAC TRANSCRIPTION FACTOR 56 1 331 - -
Mal4g1406 352 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Mal4g1406 352 MobiDBLite consensus disorder prediction 1 20 - -
Mal4g1406 352 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Mal4g1406 352 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 331 - -
Mal4g1406 352 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Mal4g1406 352 MobiDBLite consensus disorder prediction 1 17 - -
Mal4g1406 352 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1406 Mal-Chr4 20760851 20762304 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1406 1 351 NAC Transcription Factor Family AT3G15510 52.674 1.52e-119 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal4g1406 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1406 - - gmx:100170710 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1406 4 20760851 20762304 Mal4g1406 4 20760851 20762304 ECH