Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1402 ATGATAATGGGAGTTCAAGACAAAGATCCTCTTTCACAATTGAGTTTACCTCCTGGTTTTCGTTTTTACCCCACCGATGAGGAACTTCTTGTTCAATATCTATGTCGCAAAGTAGCTGGTCATCATTTTTCTCTTCAAATCATTGCTGAAATTGATCTCTACAAATTTGACCCATGGGTTCTTCCAAGTAAGGCGATTTTTGGTGAGAAAGAATGGTATTTTTTCAGTCCAAGAGATAGGAAGTATCCAAATGGGACTAGGCCCAATAGAGTAGCTGGATCTGGATACTGGAAAGCTACTGGAACGGACAAGATTATCACAAATGAAGGTAGAAAAGTTGGAATTAAAAAAGCACTTGTTTTCTATGTTGGTAAAGCTCCTAAAGGCACCAAAACCAATTGGATTATGCATGAGTATCGTCTACTTGATTCTTCTCGAAACAACGGTGGCACCAAGTTGGATGATTGGGTTCTATGTCGTATATACAAGAAAAACTCAAGTGCACAGAAAACTAATCCAAACGGAGTCGTTTCAAGTAGAGAATACACTCAATACAGCAATGGTTCATCTTCGTCTTCATCTTCACACCTCGACTCCCACATCGACGATGTTCTAGAATCACTTCCAGAAATCGATGACCGATGTTTTATGCTGCCTCGTGTCAACTCACTGCGAACGATGCAACATCGTCAACAAGAAGAAGAGAAACTGAATCTTCAGAATCTAAATGCTGCAAATAATAATTTCATGGATTGGTCTAATCCATCATCGATGTTGAACACCGTGACAGAGTTTCAAGAGGGACAAACTCAAGGAATGATGAATTTTAGTGGTTGTAATGACCTTTATGTCCCTAATGTATCTACGTTATGCAATGTGGACTCTGAGAAAACTAGCAAAATACCCGTGCATCCTACTGAGGAGGAGGTTCGGAGTGGGGTGAGAGGGAACCGGGTTGAGAATAACGGGTTATTTCAACGTGGTTCAAATGATTTTACTCAGGGAATGGGATACTCTAATTCGGTTGACCCGTTTGGGTTTAGATACCCGGTTCAACCGGTTGGGTTTGGGTTCGGGCAATGA 1083 0.41 MIMGVQDKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGTRPNRVAGSGYWKATGTDKIITNEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRNNGGTKLDDWVLCRIYKKNSSAQKTNPNGVVSSREYTQYSNGSSSSSSSHLDSHIDDVLESLPEIDDRCFMLPRVNSLRTMQHRQQEEEKLNLQNLNAANNNFMDWSNPSSMLNTVTEFQEGQTQGMMNFSGCNDLYVPNVSTLCNVDSEKTSKIPVHPTEEEVRSGVRGNRVENNGLFQRGSNDFTQGMGYSNSVDPFGFRYPVQPVGFGFGQ* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1402 360 SUPERFAMILY NAC domain 12 164 IPR036093 GO:0003677|GO:0006355
Mal4g1402 360 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Mal4g1402 360 ProSiteProfiles NAC domain profile. 16 164 IPR003441 GO:0003677|GO:0006355
Mal4g1402 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 3 339 - -
Mal4g1402 360 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Mal4g1402 360 PANTHER NAC TRANSCRIPTION FACTOR 56 3 339 - -
Mal4g1402 360 MobiDBLite consensus disorder prediction 168 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1402 Mal-Chr4 20684020 20685420 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1402 3 347 NAC Transcription Factor Family AT1G52890 57.910 4.68e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal4g1402 NAM 7.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1402 - - mtr:MTR_2g079990 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1402 4 20684020 20685420 Mal4g1402 4 20684020 20685420 ECH