Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1401 ATGACAATGCAGTTTGATGATGTTGTGTACAAAATTAAAGCCAAAAAAGGTGGATTATTTAAGAAGAACATAAAGGTAGAAGAGAAAACAATACTAAAGGGAGTAACAGGAATTGTTCAACCAGGTGAAATGTTAGCAATGTTAGGTCCATCAGGAAGTGGCAAAACAACATTGTTAACAGCATTAGGTGGAAGACTTGGTGGAAAACTTTATGGATCCATAACATACAATGAAAAACCATTTTCAAATGTAATAAAAAGAAACACAGGTTTTGTTACACAAGATGATGTTCTTTACCCTCACTTAACAGTAACTGAAACACTTGTGTTCACAGCACTTCTTAGATTACCAAATAGTGTCACAAAAGAAGAGAAAGTTAATAAAGCAAAAAATGTGATTGATCAACTTGGTTTAACAAAGTGCAAAGATAGCATTGTTGGAAATACATTTCTAAGAGGTGTTTCTGGTGGAGAAAGAAAAAGGGTTAGTATTGGACAAGAATTGCTTATAAATCCAAGTTTATTGTTTCTTGATGAACCAACTTCAGGTTTAGATTCTACTACAGCACAAAGAATTGTGTCAACTTTGTGGGATTTAGCAAGAGGAGGAAGGACTATTGTGATGACAATACATCAACCTTCTAGTAGATTATATTATATGTTTCATAAAGTTTTGTTGCTTGCTGAGGGGAATGTTTTATATTTTGGAAAAGGGTCTGAAGCTATTCAATATTTTTCTAATATTGGTTATGCCCCTGCTATGGCTATGAACCCTTCAGATTTTCTTTTGGATCTTGCAAATGGTATCTACACTGATGACATGAATCATGATCATATCATAGACAAACAAAAATTGATTTCAGCATTTAAAGGCAACTCTGATGCACAGTTGAAGCCAGAACATCAAGAAATCAATGACTCTGATCAAAGTCAGGGTAGATTTCAAGAGACAGGTTCTGGAAAATGGCCTACTAGTTGGTCACAACAATTCTTTGTACTGTTAAGAAGAGATGTTAAAGAGAGAAAGTATGAATCATTCTCAGGCCTAAGGATTGCTCAAGTCCTTGTGGTTGCACTTATGTCGGGACTACTTTGGTATAAATCTGATATGTCACACTTGCAGGATCAGATTGGACTACTATTCTTTGTAACAGGCTTTTGGGGTTTTTTCCCTCTCTTCCAAGCAATCTTCACCTTCCCACAAGAACTAATGATGCTAGAAAAAGAAAGATCCTCAGGAATGTATAGACTCTCCTCATACTTCATTTCAAGGATGGTGGCTGACCTACCAATGGAACTAGTCCTCCCCACAATATTCCTTCTCATAACATATTTCATGGCAGGACTCAAAGCAACAGTGATAAATTTCTTTCAAACACTTTTCAGCCTCTTACTCAATGTGTTAGTTTCACAAGGACTAGGACTTGCACTTGGTGCTGTTGTACTTGATCAAAAATCAGCTACAACACTTGCTTCAGTGATCATGCTATGCTTCTTACTTGCTGGTGGATTTTATGTTCAGAATGTTCCAAAGTTTATAGCTTGGGTGAAGTATGTTTCTATAAGCTATTACACTTATCAGCTATTTATTGGGTCACAGTATCATAGTGGTGACACATATCCTTGTTCTAGTGGACAGTGTCCTATTGATGAATTTCCTCCAATAAAGCAAATGGGGTTTGATTTGAATGGTCTAGGATTGGCTGCATTGGCTCTTGTTATAATGCTAGTTGGTTATAGACTTATAGCTTATTTTGCTCTTATGAGAATTGGAGTGACTAAGAAATTAGCTTAG 1794 0.3601 MTMQFDDVVYKIKAKKGGLFKKNIKVEEKTILKGVTGIVQPGEMLAMLGPSGSGKTTLLTALGGRLGGKLYGSITYNEKPFSNVIKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNSVTKEEKVNKAKNVIDQLGLTKCKDSIVGNTFLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWDLARGGRTIVMTIHQPSSRLYYMFHKVLLLAEGNVLYFGKGSEAIQYFSNIGYAPAMAMNPSDFLLDLANGIYTDDMNHDHIIDKQKLISAFKGNSDAQLKPEHQEINDSDQSQGRFQETGSGKWPTSWSQQFFVLLRRDVKERKYESFSGLRIAQVLVVALMSGLLWYKSDMSHLQDQIGLLFFVTGFWGFFPLFQAIFTFPQELMMLEKERSSGMYRLSSYFISRMVADLPMELVLPTIFLLITYFMAGLKATVINFFQTLFSLLLNVLVSQGLGLALGAVVLDQKSATTLASVIMLCFLLAGGFYVQNVPKFIAWVKYVSISYYTYQLFIGSQYHSGDTYPCSSGQCPIDEFPPIKQMGFDLNGLGLAALALVIMLVGYRLIAYFALMRIGVTKKLA* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1401 597 Pfam ABC transporter 32 182 IPR003439 GO:0005524
Mal4g1401 597 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 591 - -
Mal4g1401 597 SMART AAA_5 41 239 IPR003593 -
Mal4g1401 597 ProSitePatterns ABC transporters family signature. 154 168 IPR017871 GO:0005524
Mal4g1401 597 Pfam ABC-2 type transporter 211 311 IPR043926 GO:0140359
Mal4g1401 597 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 254 IPR003439 GO:0005524
Mal4g1401 597 CDD ABCG_EPDR 1 236 - -
Mal4g1401 597 Pfam ABC-2 type transporter 328 534 IPR013525 GO:0016020|GO:0140359
Mal4g1401 597 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 2 591 - -
Mal4g1401 597 MobiDBLite consensus disorder prediction 297 321 - -
Mal4g1401 597 Gene3D - 21 248 IPR027417 -
Mal4g1401 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 247 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1401 Mal-Chr4 20671610 20674783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1401 39 268 Calmodulin-binding Proteins AT2G36910 26.891 6.19e-12 67.0