Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1383 ATGGAGGATCCCCCACCTGGTTTTCGTTTCTACCCAACAGAAGAAGAGCTAGTTGGCTTCTATCTACACAACCAGCTGGAAGGACAAAATCATGAAGACATAAACAAAATCATACCTATCATTGATATCAATGGCAAAGAGCCATGGAACCTTCCAACATTTGCAGGGGAACGATGTCGTGGAGACACAGAGCAATGGTTTTTCTTTTCACCAAGACAAGAAAGAGAGTTGAGAGGAGGAAGACCAAGCAGAACAACATCTTGTGGGTATTGGAAAGCTACGGGTTCTCCTAGCTACGTTTACTCTTCTCAAAACAAAGTGATTGGAATCAAGAAAACCATGGTGTTTTACAATGGAAAAGCTCCTTCCGGAAGGAAAACCAAATGGAAGATGCATGAATATAAAGCCATTCAACAATTTGACCCATCAAACACAAACCCTCCTATGTTGCGTCACGAATTCAGCTTGTGTCGCGTTTATGTGATATCGGGAAGCTTTAGTTCATTTGATCGAAGACCATTAGAGAGGCCAAAAGCGGAGTTACAACATGTTGCTTCAACAAGTGATCAACAAGTGGTAGCAGAGCTCGATGGGTCAAGCTCGTATGCAACTTCCCAATCGGGAGGGGTAGGGATAGACCAAGATACTACTTTTAATATTGGAGGGTCAAGTGGCACAAATTGGAATGATGTACCAAACAATGGGGTTGATGAACTTGAAGTTCTTTGGGAATGGGAACAACTAAATTGGATCTAA 756 0.4233 MEDPPPGFRFYPTEEELVGFYLHNQLEGQNHEDINKIIPIIDINGKEPWNLPTFAGERCRGDTEQWFFFSPRQERELRGGRPSRTTSCGYWKATGSPSYVYSSQNKVIGIKKTMVFYNGKAPSGRKTKWKMHEYKAIQQFDPSNTNPPMLRHEFSLCRVYVISGSFSSFDRRPLERPKAELQHVASTSDQQVVAELDGSSSYATSQSGGVGIDQDTTFNIGGSSGTNWNDVPNNGVDELEVLWEWEQLNWI* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1383 251 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 251 - -
Mal4g1383 251 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Mal4g1383 251 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 251 - -
Mal4g1383 251 Gene3D NAC domain 13 165 IPR036093 GO:0003677|GO:0006355
Mal4g1383 251 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Mal4g1383 251 ProSiteProfiles NAC domain profile. 4 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1383 Mal-Chr4 20307866 20309159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1383 7 250 NAC Transcription Factor Family AT5G22380 54.839 3.02e-85 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal4g1383 NAM 3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1383 - - gmx:100784960 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1383 4 20307866 20309159 Mal4g1383 4 20307866 20309159 ECH
Mal4g1383 4 20307866 20309159 Mal7g1844 7 64885064 64887025 PCT