Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1368 ATGGAAATAGTTTGTTCAAAGGAAGCTCAGATGTCTATTGCTGCTTCATCTATGTTTCCTGGTTTTAGATTCTGTCCTACTGATGAAGAGTTGATTTCTTATTACCTTAGAAAAAAATTAGATGGTCATGAAGAAAGTGTTCAAGTTATTTCTGAGGTTGAACTTTGTAAATATGAACCTTGGGATTTACCAGCCAAATCATTCATTCAATCAGATAACGAGTGGTTCTTCTTCTCTCCTCGTGGAAGAAAGTATCCAAACGGTTCACAAAGTAAAAGAGCTACTGATTGTGGCTATTGGAAAGCCACAGGAAAAGAGCGCAACGTGAAATCAGGTTCTAGCGTCATAGGTACGAAGCGAACTTTGGTGTTTCACTTAGGTCGTGCACCTAAAGGCGAAAGGACCGAATGGATAATGCATGAGTACTGTGTCAGTGACAGGTCTCCGGATTCTTTGGTTGTTTGTCGCCTCAAGAGGAACACAGAGTTTCATATGAACGATGTTTCAAATAGAGCATCTTCAAGTCAAATAAACCCAGTACATTCACATGAAAGTGATTGTGCTGGTCAAATAAACCCAGTAAATTCTCACGAAAGTGATTGCGCTGTCTCAAAAGGCGGTACTGATGATCAAAGAGAAAGGGAAATCTGTGAACAAGAAAAGGAGGTTGATGGTAGCTCCAAGCGGGGAAGTAGCAGTTATGGTTCAGCTTCAATGGAACAAATTGATTCTGTGTCTGAATCAAATCAGCGACCAGTTAATGACGGTACTTTGACAGACTCTTCGGGCCAACTAAAGATGGATGAAGAGGACTGTTATGCTGAGATACTAAAGAATGATATCATAAAATTAGATGAATCGTCAATGTCTCAAGGGGCTCAAACAAGACCAAATGACCTTGCACATTCTCATCCATGCCAAGGCACTGCACAACGTAGAATACGATTAAGGGTTGCGAAATCAACGCAATCCCAACCAGGAGCTCGTTTCTCGAGAACAATGCACCAGTCCAAGAGTAGCTTATTTGCCAGAACGAGCAACCGTTTGATGATATTCACTTTCTTTGTTTTCACTCTGATGATTGTAATATTTTTTTGGTCTTCATTGGGTGGTCACAAACAAGTTAGAAATATTGTAGGAAAATTTCAGGTGTAA 1155 0.4017 MEIVCSKEAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCKYEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATDCGYWKATGKERNVKSGSSVIGTKRTLVFHLGRAPKGERTEWIMHEYCVSDRSPDSLVVCRLKRNTEFHMNDVSNRASSSQINPVHSHESDCAGQINPVNSHESDCAVSKGGTDDQREREICEQEKEVDGSSKRGSSSYGSASMEQIDSVSESNQRPVNDGTLTDSSGQLKMDEEDCYAEILKNDIIKLDESSMSQGAQTRPNDLAHSHPCQGTAQRRIRLRVAKSTQSQPGARFSRTMHQSKSSLFARTSNRLMIFTFFVFTLMIVIFFWSSLGGHKQVRNIVGKFQV* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1368 384 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 12 379 - -
Mal4g1368 384 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 379 - -
Mal4g1368 384 MobiDBLite consensus disorder prediction 167 202 - -
Mal4g1368 384 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Mal4g1368 384 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Mal4g1368 384 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Mal4g1368 384 MobiDBLite consensus disorder prediction 167 265 - -
Mal4g1368 384 MobiDBLite consensus disorder prediction 228 263 - -
Mal4g1368 384 Gene3D NAC domain 27 164 IPR036093 GO:0003677|GO:0006355
Mal4g1368 384 MobiDBLite consensus disorder prediction 203 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1368 Mal-Chr4 20145471 20147914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1368 6 369 NAC Transcription Factor Family AT2G27300 43.342 4.38e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal4g1368 NAM 7.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1368 - - mtr:MTR_2g086880 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1368 4 20145471 20147914 Mal4g1368 4 20145471 20147914 ECH