Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1362 ATGGATCCTTTATCATTAACCCTTGAAACCCCTTCTTCTACTTATCCTTCTCAAACTTCTTTTCATGTTCCTATTCCCACCTCCAATTTTATTATTTCCGACCAAATCCCTAACATTTCAACCCTCAATCCTCAAACCCCCGTTGTTTCCACCGGAGCACCTTTTCGGTCGTTACTCATCCCAAAGCCCAAACCTTTTGATGGTATCTTTGCCGCCCAAGGTTCCCAGCAACAACCTTGTTTCCCTCCTGGATATGAACCCAACGATCAATCCGACCTATACACTGAGTACTACCACAATCCACAACTTTTCAATTCTACTTTCGATGAATCCTTTTACCCTTTTCTTAGAATCGATGACTCCAACAATGCTCGTCATGTTTCAATGGAGAATTTGGTCAATGTTTCTGATCTTGAGCTAACTTTAAACCCTAATGTGGGGGTGGATTCTGTTGATAATAGAAATGATCAAGCTATTGTTGTTGTTCCGGAGAAACAAGATTTTAGTTTGGCGGTGGATGGGCTTGGGAAAAAGGCAAGCCATGTGATGGAGCTTGTAAGGGTTTCAGATATGAATATGAATGATCGGATGCATTTTCGGATGGTGATCAGGAGGACAAGGATGATTTATGATTCGCTACGCGTGTTGGCGAGTATTGAGGATGAGAAGAGAATGGCTGAGGAGAGGAAATCAGTTGCTAAGGTTGAAGTAGAGGAAGAGAGTAGATTGGCTGAGGAGAGGATCTTGGTTGCAGAAGTTGCGGTTATGGAGGCAGAGATGAGAGTGGGTGAGGAGAATAAGGTGGATGTTGCTTCAGGGGTAGAGGGGGAAATGTCAAATGAAAGAAAGAGTCGTAATCGTATTCGTTGTTATAGAAAAGCTGCAGAATTAATGAAGTATCAGGGGTTGTATTTGTATCGTGATAAGAGGATAGTTGGGTCGATACCTGGAGTTTATGTTGGTGATGTTTTTATGTATAGGATGGAATTATGTGTAATTGGTTTGCATATGCAGGTACAAGCTGGCATAGATTATCTTCCAAGAAGTAAGTGTTACAATGGCGAACCAATCGCTACTAGTGTGATTGTTTCAGGTGGTTATGAGGATGATATGGAATGGGAAGATGGTGATGTTTTAATCTATACTGGCCACGGAGGAAAAAAGAAGAATTCCTCAAGGCAAAATTGTGATCAGAAATTGGAGGGTGGAAACCTTGCTTTGGAAAGGAGTATGCATTACAGGATCGAGATTAGGGTTATTCGCGGGATGAAGTATGAAGGGAGTGCATCCAAATCCGGTAAGGTTTATGTTTATGATGGATTGTATAGGATTGTTCATTGTTCTTTTTATGTAGGAAAATCTGGTTTTGGAGTTTATAAGTATAAGCTAATGAGAATTGAAGGGCAGCCTAAGATGGGAAGTGTTATTCTAAAAGATGCTATAAAAATGAAGAAAAATGGATTTGATTTTAAGCCTATGTATTGTCTTTCAGTTGATATTTCAAACAATGTGGAGAACGTTCCTGTTAGGCTATTTAATGACATAGATGACAATCAAGAACCTCTTTATTATGAGTATCTTCCAAAAACTACTTTTCCGCAGTTTGTATTTCATCAAAGTGGGAAAGCTACTGGTTGTGAATGTGTGGAAGCTTGTGCGGATGGCTGCTTTTGCTCTATGAAGAATGGAGGAGAGTTTCCCTATAATCTAGAGGGATTGCTTGTGAGAGGGAAACCTTTGATTTTTGAATGTGGCCCTTTTTGCACTTGTCCTCCCAATTGTCGGAATCGTGTTTCACAAAAGGGGCTCAAATATAGGTTGGAAGTGTTTAGGTCTGCGCAGACGGGTTGGGGAGTTAGGTCGTTGGACCTTATTCAGGCCGGAGCTTTTATTTGTGAGTATGCAGGGGTTACTTTGACCAGGGAGCAATCTCAAATTTTAACGATGAATGGTGACTCAGTGATAAATCCTGATCGATTTTCAAATAGATGGATAGAATGGGGTGATTTATCTCAAATATACAATGGTTATATGCGACCATCATATCCTTCAATACCTCTCATAGATTATTCTCTGGATGTGTCAACAATACGAAATGTGGCTTGCTATATGAGCCATAGTTCGAATCCAAATGTATTCGTTCAATATGGTCTGTATGATCACAACAATTTGAAGTTCCCCCGTGTCATGCTATATGCAATGGAGAACATCCCTCCAATGAGGGAACTCAACATAGATTATGGCATCTCAGACGAGTGGGTGGGCAAGCTTTCTATATGTATGTAA 2286 0.4046 MDPLSLTLETPSSTYPSQTSFHVPIPTSNFIISDQIPNISTLNPQTPVVSTGAPFRSLLIPKPKPFDGIFAAQGSQQQPCFPPGYEPNDQSDLYTEYYHNPQLFNSTFDESFYPFLRIDDSNNARHVSMENLVNVSDLELTLNPNVGVDSVDNRNDQAIVVVPEKQDFSLAVDGLGKKASHVMELVRVSDMNMNDRMHFRMVIRRTRMIYDSLRVLASIEDEKRMAEERKSVAKVEVEEESRLAEERILVAEVAVMEAEMRVGEENKVDVASGVEGEMSNERKSRNRIRCYRKAAELMKYQGLYLYRDKRIVGSIPGVYVGDVFMYRMELCVIGLHMQVQAGIDYLPRSKCYNGEPIATSVIVSGGYEDDMEWEDGDVLIYTGHGGKKKNSSRQNCDQKLEGGNLALERSMHYRIEIRVIRGMKYEGSASKSGKVYVYDGLYRIVHCSFYVGKSGFGVYKYKLMRIEGQPKMGSVILKDAIKMKKNGFDFKPMYCLSVDISNNVENVPVRLFNDIDDNQEPLYYEYLPKTTFPQFVFHQSGKATGCECVEACADGCFCSMKNGGEFPYNLEGLLVRGKPLIFECGPFCTCPPNCRNRVSQKGLKYRLEVFRSAQTGWGVRSLDLIQAGAFICEYAGVTLTREQSQILTMNGDSVINPDRFSNRWIEWGDLSQIYNGYMRPSYPSIPLIDYSLDVSTIRNVACYMSHSSNPNVFVQYGLYDHNNLKFPRVMLYAMENIPPMRELNIDYGISDEWVGKLSICM* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1362 761 Pfam SET domain 616 748 IPR001214 GO:0005515
Mal4g1362 761 Gene3D SET domain 474 761 IPR046341 -
Mal4g1362 761 SMART set_7 605 754 IPR001214 GO:0005515
Mal4g1362 761 ProSiteProfiles SET domain profile. 605 748 IPR001214 GO:0005515
Mal4g1362 761 SUPERFAMILY PUA domain-like 297 478 IPR015947 -
Mal4g1362 761 SMART preset_2 497 589 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal4g1362 761 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 55 758 - -
Mal4g1362 761 ProSiteProfiles YDG domain profile. 313 465 IPR003105 -
Mal4g1362 761 SMART G9a_1 308 469 IPR003105 -
Mal4g1362 761 Coils Coil 216 236 - -
Mal4g1362 761 Pfam Pre-SET motif 500 597 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal4g1362 761 Gene3D - 310 473 IPR036987 -
Mal4g1362 761 Pfam SAD/SRA domain 312 469 IPR003105 -
Mal4g1362 761 SUPERFAMILY SET domain 490 750 IPR046341 -
Mal4g1362 761 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 55 758 - -
Mal4g1362 761 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 115 760 IPR025794 GO:0016571
Mal4g1362 761 ProSiteProfiles Pre-SET domain profile. 544 602 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1362 Mal-Chr4 20062188 20064473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1362 309 750 Su(var)3-9 homologs AT5G04940 41.648 2.09e-98 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal4g1362 SAD_SRA 6.3e-46 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1362 K11420 - aip:107626851 832.402