Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1356 ATGGTGTCTAAGATGGATCAGTATGAGATCATGGAACAGATCGGTCGCGGTGCATTCGGTGCTGCAATTCTCGTTAATCACAAGGTGGAGAAGAAAAGATATGTGTTGAAGAAAATTAGGCTTGCGAGGCAAACTGAACGGTGTAGAAGATCTGCTCATCAAGAGATGGCCCTTATTGCGAGAATTAAGCATCCTTACATTGTTGAATTCAAGGAAGCTTGGGTTGAGAAGGGTTGCTATGTCTGCATTGTTACTGGATACTGTGAAGGTGGAGACATAGCAGCATTGATGAAAAAATCAAATGGGGCATACTTTCCTGAGGAGAAACTCTGCAAATGGGTTACTCAAATACTGTTGGCAGTAGAATACCTGCATTCAAATTTTGTTTTACACCGTGACCTAAAGTGTTCTAACATCTTTCTTACCAAGGATCAGGATGTTCGCCTGGGGGATTTTGGGCTTGCTAAGACACTAAAAGCAGATGATTTGACTTCTTCGGTCGTAGGAACTCCCAACTATATGTGCCCTGAACTGCTTACAGATATTCCTTATGGATTCAAATCTGATATTTGGTCACTAGGGTGTTGTATATATGAGATGGCTGCTCACCGGCCTGCTTTCAAAGCTTTTGATTTGGATGGATTGATAAGCAAGATAAACCGTTCCTCTATTGGTACTTTGCCTCCCTGTTATTCTCCATCCTTGAAAACACTGATAAAAGGCATGCTGCGGAAAAACCCTGAGCATCGTCCAACAGCATCAGATATCTTAAAGCACCCTTATTTGCAGCCTTATGTTCAACAATATCGTTCATCTCTCTGTCCTCCAACAGCCTCTTCTCCGGAAAAGCCAATTTCTCCTGTCCATGTTCCTCGAAAAAATATGACAGAAAGTGAAAACAGTAATAGTTCGATTAGTGACAAAAGTAGTTTAATGTCAAATAAGAGAAACGTTGCAAAAGCAGCACCAAAGGGTGATGACAAAATCACTGAGGTAGACCTGTCATCGATTGATGATGATGATAATGGGTCTGACCTTCTCATGCCCGGTAGAGAAAGAAATAGCTCTAGCAATGTCAACGCCAAAACAGATAAACAGGAGGTTAGGAATCAAGCTCACATTGAGCACCATTCTAATGTTGGTTCTAAGCAGGCAAAAACAGTTAAGAATGTAATGGTAGCACCAAAACATGAAAAAGTTAGAGAGAAAAGTTCTCCAATGAGAGGGAGTCTGATGAAGGCCGGTGGTATATCAGTACAGAAAATAAATACAGAGACACTGTCTAAAATGCCGAAACCCGATTTTGGTGTTGCTGGTTTGAAGCCTAATTTAGAGGGGCCAACTATTGCACCTTCAAAAGCAACCCTTATTTCTGCAAAACGAATCCAGGGATCACTTACTTCAAAACATCAGTTACGGATGACAGAATCTACACCAAAAACTAAACCTCGACATAAGGTGACACCGCCATCTGGTCCTATCAAACAAGTAGCAGCAGAAGCTGGAGTTCCTACCAAGCCAAAACAAAAGACCTCTCCAAGCATACTTAAACCACCCTCATTTCCGGTACGTATAAGGCAAGCCAGGCATGATATACCAAATGCAGCAAATGATACAGAAAGGTTAGGTCCAAATAAAATAGCTCAGGAGCCTAAGATGAGACATCACCAGTTGCCTAACGGTCATATGACACATGTTTCTAGAGAGCCTTTGAAGGCTTCTGAAAGTAGTACCAAAGGAATGCAAACAGACAGCAACAATTCTGTCTCATCTTCGGTCTCCATTCAAGGATTTGAACTTTCTGACATTGCAACCACTTTTATTGACTTGAGTGAACCAACACTCCCTGAACATAGGAGTTTTGAACACACTGAAAATGTGGAATCACGTCCAGACAGCAGTGGACCTGCTGAAAATATTTCTGGTGAAACCTCTCCATTTACACCAACTTTTCAGAATACCATTACTAGTAATGAGAAAGTAAGTCTCAGGTTAACTCTGGATCACTCGGCAATGTATGACAGTTTTCTTATAAATCAAACAACTACATCTGATGCCTGTGAGTGTGATGATCCCTCTGCCAAAGCCACTAAAGAAATCAAAGACCTTCAAGATATTTCTAAGGAAATGGCTTCAATCAATTCTGTCAAACATTCACTTCCCATTTCTGGAAAAAAGTCTGTTTGTGAAGTTAGTCCAGTAAGCTTGCCAAATAATAGGTCTCATAAAGTTAGCCAGCCAAAGCTTATGTGCATCTCAACTGGTGATGACAAATTCATGGTGAGGAGAAGAGTGTCTTCAGTGTCTGAAACTGCTCCTCTTAATATATCTACTAAAATTACAAGCCAGAAAGTTTTACATGAAGGGAAGGGAATGGTTGTACAGAATCTAGCAACAGAAAGGCCAGCTTCTGGCCATCTTCCCCCAGCTTTTGATGATGTGATCCATGTTATACGCCATAGCAGTTACCGGGTGGGGAGTGATCTTCCAGTAATAGAATCAATGGAGAAGGGAGTTAGAAATGTAGATGTTGGTACACTCATCAATGCTGTAAAGGATGATTTAGAATTGAGAAACGCGGGAACTCCTTTGTCCAATAAATCTTCAAATTGCTCTGAAGTTACTAGTTTGAACTCAAATACTACTGATAATTTGGAAATCAGAAACTTGAGCTTGAAGTCAAGTATTTCTGACTTTCCTGGTGTTGAAGAGCAAGATGTGAAAATCTCCGATTCTCTAGTTTCAAAACCTGATTCCGCTAAATATAACAGATATAGCCCTCCTACAGCCGAAGAAGAAATGCCAGAAAAGGAATCATTGGATATTAAATCTTCCAAGCAGAGAGCTGATGCACTTGAAGGGCTGTTAGAATTGTCTGCTGATTTGCTGCAGCAAAATAGATTGGAGGAACTTGCAGTAGTTTTGAAGCCCTTTGGAAAAGATAAGGTCTCCCCAAGGGAGACAGCTATTTGGTTGGCCAAGAGTCTAAAAGGATTGATGGTTGAGGAAAGTGGGGGACATAGTTAA 3027 0.4093 MVSKMDQYEIMEQIGRGAFGAAILVNHKVEKKRYVLKKIRLARQTERCRRSAHQEMALIARIKHPYIVEFKEAWVEKGCYVCIVTGYCEGGDIAALMKKSNGAYFPEEKLCKWVTQILLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLTSSVVGTPNYMCPELLTDIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDLDGLISKINRSSIGTLPPCYSPSLKTLIKGMLRKNPEHRPTASDILKHPYLQPYVQQYRSSLCPPTASSPEKPISPVHVPRKNMTESENSNSSISDKSSLMSNKRNVAKAAPKGDDKITEVDLSSIDDDDNGSDLLMPGRERNSSSNVNAKTDKQEVRNQAHIEHHSNVGSKQAKTVKNVMVAPKHEKVREKSSPMRGSLMKAGGISVQKINTETLSKMPKPDFGVAGLKPNLEGPTIAPSKATLISAKRIQGSLTSKHQLRMTESTPKTKPRHKVTPPSGPIKQVAAEAGVPTKPKQKTSPSILKPPSFPVRIRQARHDIPNAANDTERLGPNKIAQEPKMRHHQLPNGHMTHVSREPLKASESSTKGMQTDSNNSVSSSVSIQGFELSDIATTFIDLSEPTLPEHRSFEHTENVESRPDSSGPAENISGETSPFTPTFQNTITSNEKVSLRLTLDHSAMYDSFLINQTTTSDACECDDPSAKATKEIKDLQDISKEMASINSVKHSLPISGKKSVCEVSPVSLPNNRSHKVSQPKLMCISTGDDKFMVRRRVSSVSETAPLNISTKITSQKVLHEGKGMVVQNLATERPASGHLPPAFDDVIHVIRHSSYRVGSDLPVIESMEKGVRNVDVGTLINAVKDDLELRNAGTPLSNKSSNCSEVTSLNSNTTDNLEIRNLSLKSSISDFPGVEEQDVKISDSLVSKPDSAKYNRYSPPTAEEEMPEKESLDIKSSKQRADALEGLLELSADLLQQNRLEELAVVLKPFGKDKVSPRETAIWLAKSLKGLMVEESGGHS* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1356 1008 MobiDBLite consensus disorder prediction 293 316 - -
Mal4g1356 1008 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1356 1008 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 992 - -
Mal4g1356 1008 MobiDBLite consensus disorder prediction 619 652 - -
Mal4g1356 1008 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1356 1008 MobiDBLite consensus disorder prediction 630 652 - -
Mal4g1356 1008 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Mal4g1356 1008 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Mal4g1356 1008 CDD STKc_Nek 7 262 - -
Mal4g1356 1008 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1356 1008 MobiDBLite consensus disorder prediction 549 591 - -
Mal4g1356 1008 Gene3D Transferase(Phosphotransferase) domain 1 90 335 - -
Mal4g1356 1008 MobiDBLite consensus disorder prediction 272 365 - -
Mal4g1356 1008 MobiDBLite consensus disorder prediction 570 591 - -
Mal4g1356 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Mal4g1356 1008 MobiDBLite consensus disorder prediction 349 365 - -
Mal4g1356 1008 SUPERFAMILY Protein kinase-like (PK-like) 5 311 IPR011009 -
Mal4g1356 1008 MobiDBLite consensus disorder prediction 918 939 - -
Mal4g1356 1008 MobiDBLite consensus disorder prediction 470 519 - -
Mal4g1356 1008 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 992 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1356 Mal-Chr4 19997904 20006537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1356 14 263 MAP Kinase Kinase Kinase AT1G53570 32.157 1.68e-35 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mal4g1356 Pkinase 6.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1356 K08857 - gmx:100780141 1392.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1356 4 19997904 20006537 Mal4g1356 4 19997904 20006537 ECH
Mal4g1356 4 19997904 20006537 Mal7g1809 7 63614646 63619802 PCT