Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1352 ATGGCCGATCATAAAGATGATGTAGCAATCGATGAGGGTAGTAAGAAGAGAAAAATACCTTCCTATACAGTTGTTTATGCTGAATCTTCTTCAAAGAAACCAAAAGGACCCCCTCCTGGTTCTGCTTCTGGTTCTGGGACAAAGGCTCGTATTAATATTGTTTTTATTGGTCACGTCGACTCTGGGAAGTCAACCACTGCTGGTCATTTGATCTACAAGCTTGGAGGTATCGAAAGTCAGGTAATTGAGACATTGGAGAAAGAAGCTGCTGAGATAAACAAGCGTTCATTCAAGTATGCGTGGGTGCTTGACAAGCTCAAGGCTGAGCGTGAAAGAGGTATCACAATTGATATTTCCATGTCTAAGTTCGAGACTCCCAAGTATTTCTGCACTATCATTGATGCCCCCGGACACAGGGATTTCATTAAAAACATGATCACTGGTACGTCCCAAGCCGACTGTGCTGTTCTCGTCATTGATTCCACTGCTCGTGGTTTGCGAGCTGGTATGTGTAAGAATGGTCAGACCTGGGAACATGCTTTTCTTGCCTTCACTCTTGGTGTGAGGCAAATGATCTGCTGCTGCAACAAGATGGATGTCACTGCACCCAAATACTCGAAGGAGAGGTATGAAAAAATTGTGAAGGGTGTTTCAGAGTTTTTGGTGAAGGTTGGTTTTAACATAGAGAAAATTGCATTTGTTCCCATCTCTGGTTTTGAGGGAGATAACCTGATTGAGCGCTCTACTAACATTGACTGGTACACGGGTCCCACCCTTCTTGAAGCTCTTGACCAAATCAACGAGCCTAAGAGGCCTTCAGGCAAGCCTCTGCGACTTCCACTTCGCGATGTTTACATTATTGGAGGAATTGGAACTGTGCCTGTGGGACGTGTTGAGACTGGTGTCTTGAAACCTGGAATGGTGGTGACTTTTGGCCCAACTCGGCTTCAATCTGGAGTTAAGTCTGTTCAAATGCATCGTGAAAACATCAGTGAAGCCCTTCCTGGTGATATTGTGGGATTTCACCTCACAAATAAGAAATTGTCCGATAAGAATCTCAAGCGAGGCTATGTGGCCTCGGACTCCAAGGATAATCCAACCATGGAGGCTTCTGAATTTACATCTCGCGTTATCATCACAAGTCACCCTACAAAAATTACCAAAGGCTATACTCCTGTCCTTGACTGCCACACCTCCCACATTGCTGTCAGGTTTGCTAAGCTTGTTACCAAGTTCAATAGAGAATCCGGTGTGGAATTTGAGAAGAAGCCCAAGTCCTTGAAGAATGGCGATGCCGGCATCGTTAAGATGATTCCCATGAAGCCAATGGTGGTGGAGTGTATCACTGAATACCCTTCCCTTGGCCGTTTTGCTGTCAGAGACATGCGTCAAACTGTGGCTGTTGGAGTAATTATGAATGTGAAGAACAAGGTTCCTGGTGTAGGAGGTGAGAACGGTAAGTTGGCATTGAAGAGGAAGAAGGATCCTTGTGTAGGAGGGGAGGTCACTGAGTCGGCGGTATTGGAGAACAGAATCATGGGAACTCTAATGTCGTTATTACGATAG 1566 0.4527 MADHKDDVAIDEGSKKRKIPSYTVVYAESSSKKPKGPPPGSASGSGTKARINIVFIGHVDSGKSTTAGHLIYKLGGIESQVIETLEKEAAEINKRSFKYAWVLDKLKAERERGITIDISMSKFETPKYFCTIIDAPGHRDFIKNMITGTSQADCAVLVIDSTARGLRAGMCKNGQTWEHAFLAFTLGVRQMICCCNKMDVTAPKYSKERYEKIVKGVSEFLVKVGFNIEKIAFVPISGFEGDNLIERSTNIDWYTGPTLLEALDQINEPKRPSGKPLRLPLRDVYIIGGIGTVPVGRVETGVLKPGMVVTFGPTRLQSGVKSVQMHRENISEALPGDIVGFHLTNKKLSDKNLKRGYVASDSKDNPTMEASEFTSRVIITSHPTKITKGYTPVLDCHTSHIAVRFAKLVTKFNRESGVEFEKKPKSLKNGDAGIVKMIPMKPMVVECITEYPSLGRFAVRDMRQTVAVGVIMNVKNKVPGVGGENGKLALKRKKDPCVGGEVTESAVLENRIMGTLMSLLR* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1352 521 Pfam Elongation factor Tu GTP binding domain 50 265 IPR000795 GO:0003924|GO:0005525
Mal4g1352 521 Pfam Elongation factor Tu domain 2 291 358 IPR004161 GO:0005525
Mal4g1352 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 292 IPR027417 -
Mal4g1352 521 TIGRFAM EF-1_alpha: translation elongation factor EF-1, subunit alpha 47 477 IPR004539 GO:0003746|GO:0005525|GO:0006414
Mal4g1352 521 CDD EF1_alpha_II 273 365 - -
Mal4g1352 521 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 371 475 IPR009001 -
Mal4g1352 521 PRINTS GTP-binding elongation factor signature 111 119 IPR000795 GO:0003924|GO:0005525
Mal4g1352 521 PRINTS GTP-binding elongation factor signature 131 141 IPR000795 GO:0003924|GO:0005525
Mal4g1352 521 PRINTS GTP-binding elongation factor signature 191 200 IPR000795 GO:0003924|GO:0005525
Mal4g1352 521 PRINTS GTP-binding elongation factor signature 52 65 IPR000795 GO:0003924|GO:0005525
Mal4g1352 521 PRINTS GTP-binding elongation factor signature 147 158 IPR000795 GO:0003924|GO:0005525
Mal4g1352 521 CDD EF1_alpha_III 368 471 - -
Mal4g1352 521 MobiDBLite consensus disorder prediction 26 46 - -
Mal4g1352 521 Gene3D Translation factors 272 361 - -
Mal4g1352 521 Gene3D - 45 269 IPR027417 -
Mal4g1352 521 Gene3D Translation factors 368 475 - -
Mal4g1352 521 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 104 119 IPR031157 -
Mal4g1352 521 PANTHER TRANSLATION FACTOR 48 482 - -
Mal4g1352 521 SUPERFAMILY Translation proteins 275 367 IPR009000 -
Mal4g1352 521 PANTHER ELONGATION FACTOR 1-ALPHA 48 482 - -
Mal4g1352 521 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 48 273 IPR000795 GO:0003924|GO:0005525
Mal4g1352 521 CDD EF1_alpha 52 270 - -
Mal4g1352 521 Pfam Elongation factor Tu C-terminal domain 368 474 IPR004160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1352 Mal-Chr4 19756723 19758376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1352 48 479 Eukaryotic Initiation Factors Gene Family AT5G60390 75.000 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1352 K03231 - osa:4331810 674.47