Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1351 ATGGATGATGTAGCAATCGATGAGGGTAGTAAGAAGAGAAAAATACCTTCCTATACAGTTGTTTATGCTGAATCTTCTTCAAAGAAACCAAAAGGACCCCCTCCTGGTTCTGCTTCTGGTTCTGGGACAAAGGCTCGTATTAATATTGTTTTTATTGGTCACGTCGACTCTGGGAAGTCAACCACTGCTGGTCATTTGATCTACAAGCTTGGAGGTATCGAAGTCAGGGATTTCATTAAAAACATGATCACTGGTACGTCCCAAGCCGACTGTGCTGTTCTCGTCATTGATTCCACTGCTCGTGGTTTGCGAGCTGGTATGTGTAAGAATGGTCAGACCTGGGAACATGCTTTTCTTGCCTTCACTCTTGGTGTGAGGCAAATGATCTGCTGCTGCAACAAGATGGATGTCACTGCACCCAAATACTCGAAGGAGAGGTATGAAAAAATTGTGAAGGGTGTTTCAGAGTTTTTGGTGAAGGTTGGTTTTAACATAGAGAAAATTGCATTTGTTCCCATCTCTGGTTTTGAGGGAGATAACCTGATTGAGCGCTCTACTAACATTGACTGGTACACGGGTCCCACCCTTCTTGAAGCTCTTGACCAAATCAACGAGCCTAAGAGGCCTTCAGGCAAGCCTCTGCGACTTCCACTTCGCGATGTTTACATTATTGGAGGAATTGGAACTGTGCCTGTGGGACGTGTTGAGACTGGTGTCTTGAAACCTGGAATGGTGGTGACTTTTGGCCCAACTCGGCTTCAATCTGGAGTTAAGTCTGTTCAAATGCATCGTGAAAACATCAGCTATACTCCTGTCCTTGACTGCCACACCTCCCACATTGCTGTCAGGTTTGCTAAGCTTGTTACCAAGTTCAATAGAGAATCCGGTGTGGAATTTGAGAAGAAGCCCAAGTCCTTGAAGAATGGCGATGCCGGCATCGTTCAGATGATTCCCATGAAGCCAATGGTGGTGGAGTGTATCACTGAATACCCTTCCCTTGGCCGTTTTGCTGTCAGAGACATGCGTCAAACTGTGGCTGTTGGAGTAATTATGAATGTGAAGAACAAGGAAGAAGGATCCTTGTGTAGGAGGGGAGGTCACTGA 1104 0.4574 MDDVAIDEGSKKRKIPSYTVVYAESSSKKPKGPPPGSASGSGTKARINIVFIGHVDSGKSTTAGHLIYKLGGIEVRDFIKNMITGTSQADCAVLVIDSTARGLRAGMCKNGQTWEHAFLAFTLGVRQMICCCNKMDVTAPKYSKERYEKIVKGVSEFLVKVGFNIEKIAFVPISGFEGDNLIERSTNIDWYTGPTLLEALDQINEPKRPSGKPLRLPLRDVYIIGGIGTVPVGRVETGVLKPGMVVTFGPTRLQSGVKSVQMHRENISYTPVLDCHTSHIAVRFAKLVTKFNRESGVEFEKKPKSLKNGDAGIVQMIPMKPMVVECITEYPSLGRFAVRDMRQTVAVGVIMNVKNKEEGSLCRRGGH* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1351 367 CDD EF1_alpha_III 269 350 - -
Mal4g1351 367 Pfam Elongation factor Tu C-terminal domain 268 353 IPR004160 -
Mal4g1351 367 PANTHER TRANSLATION FACTOR 268 358 - -
Mal4g1351 367 PANTHER TRANSLATION FACTOR 76 267 - -
Mal4g1351 367 PANTHER TRANSLATION FACTOR 44 76 - -
Mal4g1351 367 Pfam Elongation factor Tu GTP binding domain 76 202 IPR000795 GO:0003924|GO:0005525
Mal4g1351 367 Pfam Elongation factor Tu GTP binding domain 46 74 IPR000795 GO:0003924|GO:0005525
Mal4g1351 367 PANTHER ELONGATION FACTOR 1-ALPHA-LIKE 76 267 - -
Mal4g1351 367 PANTHER ELONGATION FACTOR 1-ALPHA-LIKE 44 76 - -
Mal4g1351 367 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 268 354 IPR009001 -
Mal4g1351 367 PANTHER ELONGATION FACTOR 1-ALPHA-LIKE 268 358 - -
Mal4g1351 367 SUPERFAMILY Translation proteins 212 268 IPR009000 -
Mal4g1351 367 Gene3D - 38 73 IPR027417 -
Mal4g1351 367 Gene3D Translation factors 259 354 - -
Mal4g1351 367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 229 IPR027417 -
Mal4g1351 367 Gene3D - 74 206 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1351 Mal-Chr4 19731374 19733217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1351 44 76 Eukaryotic Initiation Factors Gene Family AT5G60390 81.818 2.42e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1351 K03231 - aof:109848017 429.098