Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1350 ATGGTTGACTCAAAGGTTCATATCAACATGGCCGATCATAAAGATGATGTAGCAATCGATGAGGGTAGTAAGAAGAGAAAAATACCTTCCTATACAGTTGTTTATGCTGAATCTTCTTCAAAGAAACCAAAAGGACCCCCTCCTGGTTCTGCTTCTGGTTCTGGGACAAAGGCTCGTATTAATATTGTTTTTATTGGTCACGTCGACTCTGGGAAGTCAACCACTGCTGGTCATTTGATCTACAAGCTTGGAGGTATCGAAAGTCAGGTAATTGAGACATTGGAGAAAGAAGCTGCTGAGATAAACAAGCGTTCATTCAAGTATGCGTGGGTGCTTGACAAGCTCAAGGCTGAGCGTGAAAGAGGTATCACAATTGATATTTCCATGTCTAAGTTCGAGACTCCCAAGTATTTCTGCACTATCATTGATGCCCCCGGACACAGGGATTTCATTAAAAACATGATCACTGGTACGTCCCAAGCCGACTGTGCTGTTCTCGTCATTGATTCCACTGCTCGTGGTTTGCGAGCTGGTATGTGTAAGAATGGTCAGACCTGGGAACATGCTTTTCTTGCCTTCACTCTTGGTGTGAGGCAAATGATCTGCTGCTGCAACAAGATGGATGTCACTGCACCCAAATACTCGAAGGAGAGGTATGAAAAAATTGTGAAGGGTGTTTCAGCGTTTTTGGTGAAGGTTGGTTTTAACATAGAGAAAATTGCATTTGTTCCCATCTCTGGTTTTGAGGGAGATAACCTGATTGAGCGCTCTACTAACATTGACTGGTACACGGGTCCCACCCTTCTTGAAGCTCTTGACCAAATCAACGAGCCTAAGAGGCCTTCAGGCAAGCCTCTGCGACTTCCACTTCGCGATGTTTACATTATTGGAGGAATTGGAACTGTGCCTGTGGGACGTGTTGAGACTGGTGTCTTGAAACCTGGAATGGTGGTGACTTTTGGCCCAACTCGGCTTCAATCTGGAGTTAAGTCTGTTCAAATGCATCGTGAAAACATCAGTGAAGCCCTTCCTGGTGATATTGTGGGATTTCACCTCACAAATAAGAAATTGTCCGATAAGAATCTCAAGCGAGGCTATGTGGCCTCGGACTCCAAGGATAATCCAACCATGGAGGCTTCTGAATTTACATCTCGCGTTATCATCACAAGTCACCCTACAAAAATTACCAAAGGCTATACTCCTGTCCTTGACTGCCACACCTCCCACATTGCTGTCAGGTTTGCTAAGCTTGTTACCAAGTTCAATAGAGAATCCGGTGTGGAATTTGAGAAGAAGCCCAAGTCCTTGAAGAATGGCGATGCCGGCATCGTTAAGATGATTCCCATGAAGCCAATGGTGGTGGAGTGTATCACTGAATACCCTTCCCTTGGCCGTTTTGCTGTCAGAGACATGCGTCAAACTGTGGCTGTTGGAGTAATTATGAATGTGAAGAACAAGGTTCCTGGTGTAGGAGGTGAGAACGGTAAGTTGGCATTGAAGAGGAAGAAGGATCCTTGTGTAGGAGGGGAGGTCACTGAGTCGGCGGTATTGGAGAACAGAATCATGGGAACTCTAATGTCGTTATTACGATAG 1593 0.452 MVDSKVHINMADHKDDVAIDEGSKKRKIPSYTVVYAESSSKKPKGPPPGSASGSGTKARINIVFIGHVDSGKSTTAGHLIYKLGGIESQVIETLEKEAAEINKRSFKYAWVLDKLKAERERGITIDISMSKFETPKYFCTIIDAPGHRDFIKNMITGTSQADCAVLVIDSTARGLRAGMCKNGQTWEHAFLAFTLGVRQMICCCNKMDVTAPKYSKERYEKIVKGVSAFLVKVGFNIEKIAFVPISGFEGDNLIERSTNIDWYTGPTLLEALDQINEPKRPSGKPLRLPLRDVYIIGGIGTVPVGRVETGVLKPGMVVTFGPTRLQSGVKSVQMHRENISEALPGDIVGFHLTNKKLSDKNLKRGYVASDSKDNPTMEASEFTSRVIITSHPTKITKGYTPVLDCHTSHIAVRFAKLVTKFNRESGVEFEKKPKSLKNGDAGIVKMIPMKPMVVECITEYPSLGRFAVRDMRQTVAVGVIMNVKNKVPGVGGENGKLALKRKKDPCVGGEVTESAVLENRIMGTLMSLLR* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1350 530 Gene3D Translation factors 281 370 - -
Mal4g1350 530 PANTHER ELONGATION FACTOR 1-ALPHA 57 491 - -
Mal4g1350 530 CDD EF1_alpha_III 377 480 - -
Mal4g1350 530 MobiDBLite consensus disorder prediction 35 55 - -
Mal4g1350 530 Gene3D Translation factors 377 484 - -
Mal4g1350 530 SUPERFAMILY Translation proteins 284 376 IPR009000 -
Mal4g1350 530 Pfam Elongation factor Tu GTP binding domain 59 274 IPR000795 GO:0003924|GO:0005525
Mal4g1350 530 TIGRFAM EF-1_alpha: translation elongation factor EF-1, subunit alpha 56 486 IPR004539 GO:0003746|GO:0005525|GO:0006414
Mal4g1350 530 Gene3D - 54 278 IPR027417 -
Mal4g1350 530 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 113 128 IPR031157 -
Mal4g1350 530 CDD EF1_alpha_II 282 374 - -
Mal4g1350 530 PRINTS GTP-binding elongation factor signature 120 128 IPR000795 GO:0003924|GO:0005525
Mal4g1350 530 PRINTS GTP-binding elongation factor signature 200 209 IPR000795 GO:0003924|GO:0005525
Mal4g1350 530 PRINTS GTP-binding elongation factor signature 61 74 IPR000795 GO:0003924|GO:0005525
Mal4g1350 530 PRINTS GTP-binding elongation factor signature 140 150 IPR000795 GO:0003924|GO:0005525
Mal4g1350 530 PRINTS GTP-binding elongation factor signature 156 167 IPR000795 GO:0003924|GO:0005525
Mal4g1350 530 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 57 282 IPR000795 GO:0003924|GO:0005525
Mal4g1350 530 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 301 IPR027417 -
Mal4g1350 530 CDD EF1_alpha 61 279 - -
Mal4g1350 530 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 380 484 IPR009001 -
Mal4g1350 530 Pfam Elongation factor Tu C-terminal domain 377 483 IPR004160 -
Mal4g1350 530 Pfam Elongation factor Tu domain 2 300 367 IPR004161 GO:0005525
Mal4g1350 530 PANTHER TRANSLATION FACTOR 57 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1350 Mal-Chr4 19710387 19712067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1350 57 488 Eukaryotic Initiation Factors Gene Family AT5G60390 75.000 0.0 674