Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1345 ATGTTGATAGAACAAATTTCCAAGTTGATATTTTTTTGTTTAATCATTAGAATATGTTATGGTGCTACAAACCCTAATGATCTCAAAGTTTTGAATGATTTTAGAAAAGGATTAGAAAATCCAGAGCTTTTGAAATGGCCAGAAAAAGGAAACAATGATCCATGTGGTCCACCATCATGGCCTTATGTGATCTGTTCTGATGATAGAGTCACTCAGATTCAAGCTAAGAATCTTGGTCTTAGAGGAACATTGCCACAAAACTTTAACCAACTCTCAGAACTCTATAATTTAGGTCTTCAACGAAACAATCTTACCGGAATGTTACCAAGTTTTCGCGGTTTATCTAAATTAGAATTCGCTTTCTTGGATTACAATTCATTTGATGCTATTCCTTCTGATTTCTTCAATGGATTAACAAGCCTTAGGGTTTTGTCTTTGGAAGAAAATCAGCTCAATGTTAGTACTAATGGTTGGTCATTTCCTTCGGATTTGGAAAAATCGGTTCAGTTAACTAATCTTTCATTGGTTCATTGTAATTTGGTTGGATCTTTACCTGATTTTGTAGGCACATTGCCATCTCTTACAAATCTAAGGCTTTCAAACAACAAACTTTCCGGTATGATTCCGGCTACTTTTGCTCAATCTTCAATTCAGGTTTTGTGGTTGAATAATCAAGAAGGAGAAGGTGGTTTTACAGGCTCTATTGATGTTATTGCTTCAATGGTTTTCTTAACACAGATTTGGCTACATGGAAACAAGTTCTCAGGTACAATTCCAAACAATATTGGAAATCTCACTTCTTTGAAGGAACTCAATCTTAATAGTAATCAATTTGTTGGGTTGGTTCCACAATCCTTAGCAGAAATGAATCTTGATTTACTTGTTTTGAACAATAACATGCTAATGGGTCCAATACCAAAGTTTAAAGCTGCAAACTTTACTTATGATGATAATCTCTTTTGTCAAACTGAGCCAGAACTTCAATGTTCACCAGAAGTTACATCACTGCTTGATTTTCTGAATAATCTGAATTATCCGTCGTTTCTAATTTCCGATTGGTCAGGTAATAAACCATGTACAAGTAGCACAGGAACATGGTTTGGATTAAGCTGCAATTCAAACTCTGAGGTATCTATAATTAATCTACCAAAACATAAGCTTAATGGTAGTTTAAGTCCTTCACTTTCTAAGTTAGATTCACTCCTTGAAATTAGGCTTGCTGGAAATAATATAACTGGCATAGTTCCTAGTGATTTTACTAAATTGAAATCATTGAAGTTGTTGGATTTAAGTGACAATAATCTTGAATCTCCGTTGCCGGATTTTCATGATGGTGTGAAGGTTATTACTGTTGGTAACCCTTTTCTTACTAATCAAACTGGAGGGAGTACTAGTCCTGCTATTAGCAGCCGCGGCCCGAGTTCGGAAAACAACCCTTCACATTCTCCATCTTCACTTAATCAGCCAGTTCCAAGCTCAAATCACAAAAGATTCAAGACAGTAGGAACAGTGGTTGGTGCTGCAGTGTTTGCAGTTGGAGCATTTTTGGTTGTTTATCTCTTTTTATGTTTCTTTATGAACAAGAAAAAAACCTCGTTGGATGCTCCGAGTTCCGTTGTGGTTCACCCAAGAGATCCGTCTGATCCGGACAATGTATTTAAAATTGCTGTTTCAAGCAGTAACACTGGAAGCTCATCAGGAAAAACTGGGACAAGTTCTCTGAGTAACTTAAGTGGTGAAACTCAAAACTCTTACTTTATTGAGGCTGGTAACCATGTTATATCGGTGCAAGTGCTACGCAAGATTACAAACAATTTTGCATCGGAAAATGAGCTAGGCCGCGGTGGATTTGGAACTGTTTACAAAGGGGAATTAGAAGATGGAACCAAAATAGCAGTGAAGAGAATGGAGAATGGAGCTATAGGCAGTAAGGCATTAGATGAGTTTCAATCTGAAATAGCTGTTCTTTCTAAGGTTCGTCACCGGCATTTGGTATCTCTTTTGGGGTATTCCATTGAAGGAAATGAAAGACTTCTAGTTTATGAGTATATGCCACTTGGTGCTCTAAGTCAGCATCTTTTTCATTGGAAAAAGTTCGACTTAAAGCCTTTGTCTTGGGCACAAAGACTCGTAGTAGCACTAGATGTTGCTAGAGGGATGGAATATCTTCACGGTCTTGCTCGCGAGACCTTTATTCATAGAGATCTCAAAACTTCTAATATTCTACTAGGCGATGATTTTCGTGCAAAAGTTTCGGATTTTGGTCTTGTGAAACTTGCTCCGAATGGTGAAAAATCTGTGGTAACCAAACTTGCTGGGACATTTGGTTACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACAAAAGTTGATGTGTTCAGCTACGGAGTGGTGTTAATGGAACTTCTAACCGGACTAACGGCACTTGATGAGAGCCGGTCAGAGGAAATCCGATACTTGGCCGAATGGTTTTGGCGAATTAAATCAAACAAAGAAAAATTTATGGCTGCTATTGATCCAGCTTTGGAACCAAATGAAGAGACCTATGAAAGTATAACTATTGTAGCAGAACTTGCTGGACACTGCACTGCTAGAGAAGCATACCATAGGCCAGATATGAGTCATGCTGTCAATGTATTATCAGCACTTGTAGAGAAATGGCGACCGGTTGACGATGAATTCGATTTCTATTCTGCCGTTGACGACACTCGACAACTTCCTGAAATGTTGAAAATTTGGAAGGATGCAGAAAGCAGTGAGTTTAGCTATAGTGCTGCTAGTCTTGAAGACAGTAGAGGAAGTATTGCTGTGAGGCCTGCTGGATTTGCTGACTCTTTCACTTCTACTGATGCTAGATGA 2865 0.3832 MLIEQISKLIFFCLIIRICYGATNPNDLKVLNDFRKGLENPELLKWPEKGNNDPCGPPSWPYVICSDDRVTQIQAKNLGLRGTLPQNFNQLSELYNLGLQRNNLTGMLPSFRGLSKLEFAFLDYNSFDAIPSDFFNGLTSLRVLSLEENQLNVSTNGWSFPSDLEKSVQLTNLSLVHCNLVGSLPDFVGTLPSLTNLRLSNNKLSGMIPATFAQSSIQVLWLNNQEGEGGFTGSIDVIASMVFLTQIWLHGNKFSGTIPNNIGNLTSLKELNLNSNQFVGLVPQSLAEMNLDLLVLNNNMLMGPIPKFKAANFTYDDNLFCQTEPELQCSPEVTSLLDFLNNLNYPSFLISDWSGNKPCTSSTGTWFGLSCNSNSEVSIINLPKHKLNGSLSPSLSKLDSLLEIRLAGNNITGIVPSDFTKLKSLKLLDLSDNNLESPLPDFHDGVKVITVGNPFLTNQTGGSTSPAISSRGPSSENNPSHSPSSLNQPVPSSNHKRFKTVGTVVGAAVFAVGAFLVVYLFLCFFMNKKKTSLDAPSSVVVHPRDPSDPDNVFKIAVSSSNTGSSSGKTGTSSLSNLSGETQNSYFIEAGNHVISVQVLRKITNNFASENELGRGGFGTVYKGELEDGTKIAVKRMENGAIGSKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSQHLFHWKKFDLKPLSWAQRLVVALDVARGMEYLHGLARETFIHRDLKTSNILLGDDFRAKVSDFGLVKLAPNGEKSVVTKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLTALDESRSEEIRYLAEWFWRIKSNKEKFMAAIDPALEPNEETYESITIVAELAGHCTAREAYHRPDMSHAVNVLSALVEKWRPVDDEFDFYSAVDDTRQLPEMLKIWKDAESSEFSYSAASLEDSRGSIAVRPAGFADSFTSTDAR* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1345 954 PANTHER OSJNBA0070M12.3 PROTEIN 6 954 - -
Mal4g1345 954 SMART serkin_6 606 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1345 954 ProSiteProfiles Protein kinase domain profile. 606 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1345 954 PRINTS Leucine-rich repeat signature 194 207 - -
Mal4g1345 954 PRINTS Leucine-rich repeat signature 422 435 - -
Mal4g1345 954 Pfam Protein tyrosine and serine/threonine kinase 609 880 IPR001245 GO:0004672|GO:0006468
Mal4g1345 954 Gene3D Phosphorylase Kinase; domain 1 568 683 - -
Mal4g1345 954 SUPERFAMILY L domain-like 50 442 - -
Mal4g1345 954 Gene3D Transferase(Phosphotransferase) domain 1 684 902 - -
Mal4g1345 954 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524
Mal4g1345 954 Gene3D Ribonuclease Inhibitor 331 459 IPR032675 -
Mal4g1345 954 SMART LRR_typ_2 265 288 IPR003591 -
Mal4g1345 954 SMART LRR_typ_2 398 421 IPR003591 -
Mal4g1345 954 SMART LRR_typ_2 191 214 IPR003591 -
Mal4g1345 954 SMART LRR_typ_2 138 161 IPR003591 -
Mal4g1345 954 SMART LRR_typ_2 91 113 IPR003591 -
Mal4g1345 954 SMART LRR_typ_2 114 137 IPR003591 -
Mal4g1345 954 SMART LRR_typ_2 422 444 IPR003591 -
Mal4g1345 954 SUPERFAMILY Protein kinase-like (PK-like) 583 882 IPR011009 -
Mal4g1345 954 MobiDBLite consensus disorder prediction 457 493 - -
Mal4g1345 954 CDD STKc_IRAK 612 882 - -
Mal4g1345 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Mal4g1345 954 Gene3D Ribonuclease Inhibitor 25 326 IPR032675 -
Mal4g1345 954 PANTHER OSJNBA0070M12.3 PROTEIN 6 954 - -
Mal4g1345 954 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Mal4g1345 954 Pfam Leucine rich repeat N-terminal domain 331 372 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1345 Mal-Chr4 19651442 19654634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1345 44 887 Receptor kinase-like Gene Family AT1G56120 29.712 8.47e-78 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mal4g1345 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1345 - - cam:101493565 1550.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1345 4 19651442 19654634 Mal4g1345 4 19651442 19654634 ECH