Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1341 ATGGGTTTTTTGTTGAAAGAAGCTTTGAAGACTCTGTGTGGTAGGAATAATCAATGGTCTTATGCTGTGTTTTGGAAGAGTGGTTGCAACAATTCTAAGCTATTAATTTGGGAAGAATGCTATTATGAACCCTTTTCATGTCCTTCCCCTCATGACATTGTTGGGATGTTGAATTTGCCGAATCCGAACGGGGAAGGGAGTTGGTTTTCTTCTGAGTTTCAATCGCCTCATCTAGGAATCCAAGAGGAGGATAAAGTCTCTTCTTTGGTTAACAAAATGACTGTAAATAATTTAATCATCGTTGCAGGGGAAGGTATAATTGGACGCGCTGCATTTACCAACAGTCATGAGTGGATTCTCTTGAATGATTTCGCTAAAAATGCGTATCCACCTGAGGTATATGCTGAAATGCATCACCAATTTTCAGCTGGAATGCAGACAGTCGCAGTTATTCCTGTTCTTCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTTCCTATAATGGAGAATATGGGATTTGTGCACGAAGTAAAGAGCCTGATTTTGCAACTAGGGTGTATTCCTAATGCCCTTCTCTCCGAAGACTATTCAGCTAAACTTTCAAATGAAAGACTTGTTGGACCTGCCACTTCTGGTGTGCCTGTGTCTGTTGATGCATCGGCCATTACCTCGAATTCCACTCCTTCAGCAGTTAGTGGCTCCAATCACCGAAGTTATTCATCACACGCTTCAAAGCCTAATGTTCAAACACTTCGTCCTTTAAGTGGAGAAATTAGTAACTGTCAGGGTAGAGTTATGGAGGCTCAAGTGATACCCTCAAATTTTGATTCAAGCATGCAGAAGCATTCTGTTTCATTTAATGCAAGATCTGAATTAAATAACTTTGCCAGTTCTGCGCCGTTTGGTCAGTCCGGTCAAAGTGATTGTAGCCTAAAATATATGGAACAACAAATCTTATCAGCAGTTGGGAGTCGTGATCATGTTAATCCTAGTGTTAATGTGTCAAGTTCCTTAAACATTTCTCTACTAAAAACAGATAGAAGCCTTAACGCCCGCCATAATCCTACTTCTAGCAGTACTTCCTTACTTAGAGGAATCCCGGTACATGGTGGAATGAATAGCATTTTGAGGACAAATCTGATTTCTAGCTCAAAATCACCTAAAGTATCTGCAGCTAATTTCTCTGGAGCACAAGTTGGGAATGAACTTCAAAATGAAGATTCAGCTTTAAAGTTTGCTTCAACAGATCAAAAGATAAACTATGACATGCTTCAGGCTCAAAACATCCCCTCTTTTAATCCCGAGGAGCATGTGCCAAGTAGTGGTCATATCCCAAGTTTTCAAAAAGATGGTACCAATCAATTTATGATGACAACGAATCCTAAACATGAAGAAGCTTGTGCTCAACAACCTCCATCAGGTGGTGATGACCTGTTTGATATTTTAGGTGTGGATTTTAAAAACGAGCTTCTGAAAGGACACTGGAATGAACTGTTTGCTGATGAATTAGATGGTAATGCAGAAAATAAGGTTAAAAAGGAATCATGCATGAACATGGAGGGTACGAATTCTGATTATTATTGTTCAGTGAATGAGTCAATGTCGGACAGTGGCATTTTTTCTGGGATGTCAACAGACCACCTCTTGGATGCGGTGGTCTCGAAGGCCAAACCGACTTTGAAGCAGAATTCCGATGGCATGTCTTGCAAAACAACATTGACAGGGAATAGTACCGCCTCTATTCCCTCCCGTGTCCGTAAGCAGGTTATGTCCGGTAGTTTCGAAGGGGGGATGTTTGGTTTTTTGAAGAGTGGAGGTAAAATGGGTGCTGTAGAAACTGGTTCTCTAAGCTCTGTTCGTAGCAAGGATGATGGTGGAAAATGCTTTCAAACTACAACTGTATGTGGTTCTCAACTTAGTTCATGGTTGGAGAATGGTGGCAATGTGAAGCGTGAAAATAGTGTTTCAACTGGATACTCTAAGCGCCCGGATGAAGCTTGCAAGTCTAATCGCAAAAGGCTTAAACCAGGAGAGAATCCCAGGCCTAGACCTAAAGATCGACAAATGATTCAAGATCGTGTCAAAGAGTTACGAGAAATTGTTCCAAATGGAGCAAAATGTAGCATAGATGCACTGCTGGAACGGACCATTAAGCATATGCTTTTCTTGCAAAGTGTGACAAAGCACGCTGACAAGCTGAAACAAACTGGGGAGTCTAAGATTATTAGTAAGGAAGGAGGGCTGGTTTTTAAAGACAGCTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCCCAATCAATGGTTTGTCCTATTATAGTTGAAGATTTGAATACTCCTCGTCAGATGCTAGTCGAGATGCTTTGCGAGGAACAGGGTTTCTTTCTGGAAATAGCTGACTTAATCCGAGGATTAGGCTTAACCATCTTGAAGGGGGTAATGGAAGCTCACAATGGCAAAATCTGGGCTCGTTTCGTTGTTGAGGCAAATAGGGACGTAACGAGGATGGAAATATTTATGTCACTCGTTCGTCTTCTGGAGCAAACAATTAAGGGTAATGCATCTTCATGCAATGCAATTGATGATATGTTGCGTTTTAACTCTTTACCCCCAGAAGGCCTAATAGTATGA 2634 0.4142 MGFLLKEALKTLCGRNNQWSYAVFWKSGCNNSKLLIWEECYYEPFSCPSPHDIVGMLNLPNPNGEGSWFSSEFQSPHLGIQEEDKVSSLVNKMTVNNLIIVAGEGIIGRAAFTNSHEWILLNDFAKNAYPPEVYAEMHHQFSAGMQTVAVIPVLPHGVVQLGSFFPIMENMGFVHEVKSLILQLGCIPNALLSEDYSAKLSNERLVGPATSGVPVSVDASAITSNSTPSAVSGSNHRSYSSHASKPNVQTLRPLSGEISNCQGRVMEAQVIPSNFDSSMQKHSVSFNARSELNNFASSAPFGQSGQSDCSLKYMEQQILSAVGSRDHVNPSVNVSSSLNISLLKTDRSLNARHNPTSSSTSLLRGIPVHGGMNSILRTNLISSSKSPKVSAANFSGAQVGNELQNEDSALKFASTDQKINYDMLQAQNIPSFNPEEHVPSSGHIPSFQKDGTNQFMMTTNPKHEEACAQQPPSGGDDLFDILGVDFKNELLKGHWNELFADELDGNAENKVKKESCMNMEGTNSDYYCSVNESMSDSGIFSGMSTDHLLDAVVSKAKPTLKQNSDGMSCKTTLTGNSTASIPSRVRKQVMSGSFEGGMFGFLKSGGKMGAVETGSLSSVRSKDDGGKCFQTTTVCGSQLSSWLENGGNVKRENSVSTGYSKRPDEACKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLVFKDSFEGGATWAYEVGSQSMVCPIIVEDLNTPRQMLVEMLCEEQGFFLEIADLIRGLGLTILKGVMEAHNGKIWARFVVEANRDVTRMEIFMSLVRLLEQTIKGNASSCNAIDDMLRFNSLPPEGLIV* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1341 877 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 180 IPR025610 -
Mal4g1341 877 MobiDBLite consensus disorder prediction 648 689 - -
Mal4g1341 877 MobiDBLite consensus disorder prediction 664 689 - -
Mal4g1341 877 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 410 872 IPR043561 GO:0003700|GO:0006355
Mal4g1341 877 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 412 IPR043561 GO:0003700|GO:0006355
Mal4g1341 877 MobiDBLite consensus disorder prediction 224 250 - -
Mal4g1341 877 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 410 872 - -
Mal4g1341 877 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 674 723 IPR011598 GO:0046983
Mal4g1341 877 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 412 - -
Mal4g1341 877 CDD bHLH_AtLHW_like 678 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1341 Mal-Chr4 19594893 19600298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1341 474 874 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.691 2.21e-112 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1341 - - cam:101492357 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1341 4 19594893 19600298 Mal4g1341 4 19594893 19600298 ECH
Mal4g1341 4 19594893 19600298 Mal7g1799 7 62884128 62890640 PCT