Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1327 ATGGATCCCTTGATCCGCAAGCTCCGCCGCCATCTTCTCCGTTGGCTTCACCGATCTCGTTCCGGATCGGTGTTTTTTGTGAGGAGAATTTCGTATAAGGAAGTGAGAAAAGCAACTGATAGTTTTCAAAGAATTGTTTATAGCAATTCAGAAGTTTCTGCATACGCTGCGAATTTTGGAGAGGAAGATGGTGGTGTTTGTTTGGTGAAAGAATTGAAAGATTTTGATAAAGGAAATGATGAGAATTTTCATAGACAAGTGCAGTTGTTGGGACGATTGCATCATCGACATCTTCTTTCGCTTAAAGGTTTTTCTTTGGGACATGATCGCAAGAGCAAGAGACTGCTCATATTTGACAACATAGAAAATGGAAGCTTAAAGGAACATCTCAACGACCCCTTGAAGACTCCCTTAAATTGGAGGACGAGGTTGCAGATAGCTAATGGTGTTGTAGCTGCACTGGAGTACTTGTTTCTCTTCAGTGAACCACCAATAAGTCATGTCTCTATCAGCTCTAGCAATATTATGTTAGATGAGAACTTCACCCCTAAGCTATCTGATTTTGGCCTTCTTACTGGTGGAAGTTCTCCATATTCACAAGATTGCATGGGGCCGGAAAGTTGCAAGATTATATTCCAACTTGGAGTGCTCATACTGGAACTTGTAACAGGTCAATCTTCGGAGATGGAAGGTTCTGATTTAATTGAGTGGATACAAGAATCCCGATTTTTCAGTTCAATAGATAAGATGTTAGACCCTGATCTTGGAAACAGTTATGACTATACGGAGCTTAAAAGTCTTCTAGCTGTGGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATATACAATTCCTCAGTTATTTAGATATCTCCAAAAGGAGACTGATATTCCCCAAGATTAG 906 0.4018 MDPLIRKLRRHLLRWLHRSRSGSVFFVRRISYKEVRKATDSFQRIVYSNSEVSAYAANFGEEDGGVCLVKELKDFDKGNDENFHRQVQLLGRLHHRHLLSLKGFSLGHDRKSKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSEPPISHVSISSSNIMLDENFTPKLSDFGLLTGGSSPYSQDCMGPESCKIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFFSSIDKMLDPDLGNSYDYTELKSLLAVAKLCIKSWDKPSYTIPQLFRYLQKETDIPQD* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1327 301 Pfam Protein tyrosine and serine/threonine kinase 60 193 IPR001245 GO:0004672|GO:0006468
Mal4g1327 301 SUPERFAMILY Protein kinase-like (PK-like) 24 257 IPR011009 -
Mal4g1327 301 PANTHER OS01G0253100 PROTEIN 1 296 IPR045271 GO:0004714|GO:0006468
Mal4g1327 301 Gene3D Phosphorylase Kinase; domain 1 17 119 - -
Mal4g1327 301 ProSiteProfiles Protein kinase domain profile. 10 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1327 301 Gene3D Transferase(Phosphotransferase) domain 1 121 299 - -
Mal4g1327 301 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1327 Mal-Chr4 19259662 19262523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1327 22 297 Receptor kinase-like Gene Family AT3G19300 36.877 9.39e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Mal4g1327 PK_Tyr_Ser-Thr 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1327 - - aprc:113853565 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1327 4 19259662 19262523 Mal4g1327 4 19259662 19262523 ECH