Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1325 ATGTCAATGGATATGAATATGATGGCAACAAATGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACTACTCTAGCGGTTAGTGTTCCATGCAGTAGCTTGCTGACCATAGTGACAGTTAGATGTGGGCATTGTGCTAATTTGCTTTCAGTTAACATGGGAGCATCACTTCAATCTTTTCCTCCTCAACAACAAGACCATCCTCAGTTACAGAAACAGCAGGTTATAAACTGTCATCAAGAAGCTGTAGGATCATCATCATCATCATCATCTTCTTCTTCTTCTTTAAAATGCAAAGCCTTTCAGCCATTAGTCCACGAGCAACCTAGGACTCCTCCTATTCGTCCTCCGGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATACAAAGAATTAAGGCTGGTAATCCAGATATCAGTCACAGGGAAGCATTTAGCACAGCAGCTAAAAACTGGGCACATTTTCCTCACATTCACTTTGGGTTAAAGTTGGATGGTAGCAAGCAAGCAAAGTTGGACCATGGGGTTGGGGAAGCTACTCAAAAGTCTAACGGATTCTATTGA 585 0.4171 MSMDMNMMATNERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQSFPPQQQDHPQLQKQQVINCHQEAVGSSSSSSSSSSSLKCKAFQPLVHEQPRTPPIRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQAKLDHGVGEATQKSNGFY* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1325 194 Pfam YABBY protein 10 169 IPR006780 GO:0007275
Mal4g1325 194 PANTHER AXIAL REGULATOR YABBY 2-RELATED 9 194 - -
Mal4g1325 194 PANTHER PROTEIN YABBY 6-RELATED 9 194 IPR006780 GO:0007275
Mal4g1325 194 Gene3D High mobility group box domain 107 165 IPR036910 -
Mal4g1325 194 SUPERFAMILY HMG-box 108 162 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1325 Mal-Chr4 19225923 19232794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1325 1 194 C2C2-YABBY Transcription Factor Family AT1G08465 62.626 4.98e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mal4g1325 YABBY 4.8e-73 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1325 K25796 - gmx:100785458 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1325 4 19225923 19232794 Mal7g1766 7 61940785 61949815 PCT