Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1321 ATGGACGAGATTCCTGTGATTGAAGAGAATGAAACAAAGTCTGAGGCGCATTTGACTTCAGCTGCTGCTTTTGTGGAAGGTGGAATTCAGGATGCTTGTGATGATTCTTGTAGTATATGTCTTGAAGAATTTATCGACAGTGATCCTTCTACGGTGACGAGTTGCAAGCATGAGTTTCATCTTCAATGTATTCTCGAATGGTGTCAGAGGAGCTCCCAGTGCCCCATGTGTTGGCAATCTATCAGTCTCAAGGATCCAACGGGCCAGGAATTGCTCGAGGCAGTTGAGAGAGAGCGGAACATTAGGTTCAATCCGACTAGAAATGCCACAATATTTCATCATCCAACACTGGGGGATTTTGAGTTACAACATTTGCCAGCTGGAGCAAATGATGCTGCTGACCTTGAAGAGCGTATACTCCAACACTTTGCTGCTGCAGCAGCAATGGGGCGAGCACGCCATATTGCTAGAAGAGAAGGCCAGAGAAATAGGTCATCAGCTCAAGGTCGCCCGCAGTATTTGGTATTTTCAGCCCATCCTAATTCACCTCCCATGGCTCCTGCTTCTTCCTCCCCACCTCAGAGAGGGGATGGTGAACCAACTCCTGCGACTGGAGAAGAACCACCACAGCTCACTTTAGTTCCTCCAGTTCAAACCGACCAGGTTTCTGCTTCAGGATCTGGGTCGGCTGCTCTTGCTACTGATAATCAGGGATTAACTTATAACAGCAGGAGATCTCCTAATCAGTCTTCTACAAGTAGCCAAGACACAGCAGGACCATCAGAACTCCAATCATTTTCAGAATCTCTGAAATCTAAACTAAATGCCGTGTCTATAAGATACAAAGAGTCAATTTCCAAGAGCACAAGAGGGTGGAAGGAGAGGTGGTTCTCTCGGAACAGCCCTATGTCTGATCTTGGATCTGAAGTTAAGCGAGAAGTTAATGCAGGGATCGCAACTGTGTCACGCATGATGGAACGCTTGGAGACCAGAGACAATAATAGAAACAGTAGTGATTCTGCTCCAAGTAGTTTAGAGGATGGTCCAATTGAGGGATCAAATGATCAGCACTTGACAGACACTGAGAGGGACAGTCTTTTTAGAGACAATAATACAAAAACATCTTGCACTGCAGGTTCTAGTTCAAATTAA 1152 0.4566 MDEIPVIEENETKSEAHLTSAAAFVEGGIQDACDDSCSICLEEFIDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQSISLKDPTGQELLEAVERERNIRFNPTRNATIFHHPTLGDFELQHLPAGANDAADLEERILQHFAAAAAMGRARHIARREGQRNRSSAQGRPQYLVFSAHPNSPPMAPASSSPPQRGDGEPTPATGEEPPQLTLVPPVQTDQVSASGSGSAALATDNQGLTYNSRRSPNQSSTSSQDTAGPSELQSFSESLKSKLNAVSIRYKESISKSTRGWKERWFSRNSPMSDLGSEVKREVNAGIATVSRMMERLETRDNNRNSSDSAPSSLEDGPIEGSNDQHLTDTERDSLFRDNNTKTSCTAGSSSN* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1321 383 MobiDBLite consensus disorder prediction 326 383 - -
Mal4g1321 383 ProSiteProfiles Zinc finger RING-type profile. 37 77 IPR001841 -
Mal4g1321 383 Pfam Ring finger domain 35 77 IPR001841 -
Mal4g1321 383 SMART ring_2 37 77 IPR001841 -
Mal4g1321 383 MobiDBLite consensus disorder prediction 335 350 - -
Mal4g1321 383 MobiDBLite consensus disorder prediction 214 266 - -
Mal4g1321 383 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 9 383 - -
Mal4g1321 383 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 9 383 - -
Mal4g1321 383 MobiDBLite consensus disorder prediction 175 266 - -
Mal4g1321 383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 86 IPR013083 -
Mal4g1321 383 SUPERFAMILY RING/U-box 30 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1321 Mal-Chr4 19180727 19184787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1321 34 85 C3H Transcription Factor Family AT5G15790 46.154 2.59e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1321 K19043 - gmx:100780275 589.726