Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1311 ATGGTGGAAGATGACATAGCAACCAATTCAGAAGACAAAAGAGCTAATCTTGAGATGGCTGTTCTTCAAGCTGAGCTTGAGAGAATGAAGGTGGAGAATCATCAACTGAGGAACATGCTTGATGAGGGTAATAGGAATTACAACACATTGCATATGCATTTGATGAGTTTGATGCAAGAGAGAAAGGTAGAGGATTGTAATGAAGAGCAAAAGCAAGTGTTTGATGGAAAAAAAAAAGAGGAGAAACAAAATGGGAATGGTGGAGTTTTGGTTCCAAGACAATTTATGGATCTTGGATTGGCTACTAATAATTCTGATGAACCAAGAAGTCAAGATCAGTCAAAATCACTTGCAAACAACATTGAAGAAGGTTCCAAGGATGAAGCTCTTGTGTTTGATCATGACAAGAAGGAATCTGATCGGCGAAATGAAAGAAATGGTAGTCCTGCCGATCAAGTTTTAGCCGCTAATAATAACAATGTTCCAAACATTAGTCCTCAAACTAATGTTGAACAAGCTGAGGCAACCATGAGGAAAGCAAGGGTTTCAGTTCGAGCTCGATCCGAGGCTACCATGATCAATGATGGGTGTCAATGGAGAAAGTATGGACAGAAGATGGCGAAAGGAAACCCGTGTCCTCGAGCTTATTATCGATGCACCATGGCTTTAGGCTGTCCTGTGAGAAAACAGGTACAAAGGTGTGCTGAAGACAGATCAATACTTATCACAACATATGAAGGACACCACATTCATGCTTTGCCACCAGCAGCTATGGAAATGGTACAAACAACATCATCAGCTGCAAGAATGTTGCTATCCGGACCAATGACAAGTGCTGACGGCCTAATGAACCCGAATTTCCTCACAAGAGCAGTCCTTCCTTATTCTTCAAGCATTGCAACTATCTCAGCATCAGCTCCATTTCCGACTGTTACATTGGACTTAACTCAGCCACCAAATACAAACCAGTTTCCTAATAACCACCAAAACCAGTTCCAATTTCCCTTCCCTCAAAATTTTCTGCCTCAGGTATTTGGTCAGACATTGTTGAACCAATCAAAATTTTCAGGACTTCAAATGTCTCAAGATGCAGCAAACAGTTCTCAGCAGACACCACAGAATCTTGCTGACACAGTTAATGCTATTGCAGCTGATCCTAACTTCACTGCAGCTTTGGCAGCTGCTATTACTTCAATTATTGGGGCTGCACAGCCAAACAATAATAACAGTACCAGTAATAATGGTAACAGTACAACAGCCAACAACAGTAATGGCAATGTTACATCAAGTAGCAATACCAATGGAAGCAATAAAATCAACAATCCCAATTCCTCAGTAGAGTAG 1344 0.41 MVEDDIATNSEDKRANLEMAVLQAELERMKVENHQLRNMLDEGNRNYNTLHMHLMSLMQERKVEDCNEEQKQVFDGKKKEEKQNGNGGVLVPRQFMDLGLATNNSDEPRSQDQSKSLANNIEEGSKDEALVFDHDKKESDRRNERNGSPADQVLAANNNNVPNISPQTNVEQAEATMRKARVSVRARSEATMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDRSILITTYEGHHIHALPPAAMEMVQTTSSAARMLLSGPMTSADGLMNPNFLTRAVLPYSSSIATISASAPFPTVTLDLTQPPNTNQFPNNHQNQFQFPFPQNFLPQVFGQTLLNQSKFSGLQMSQDAANSSQQTPQNLADTVNAIAADPNFTAALAAAITSIIGAAQPNNNNSTSNNGNSTTANNSNGNVTSSSNTNGSNKINNPNSSVE* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1311 447 MobiDBLite consensus disorder prediction 68 84 - -
Mal4g1311 447 PANTHER OS05G0567200 PROTEIN 1 426 - -
Mal4g1311 447 MobiDBLite consensus disorder prediction 98 120 - -
Mal4g1311 447 SMART WRKY_cls 193 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal4g1311 447 Pfam WRKY DNA -binding domain 194 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal4g1311 447 MobiDBLite consensus disorder prediction 68 166 - -
Mal4g1311 447 Coils Coil 7 46 - -
Mal4g1311 447 MobiDBLite consensus disorder prediction 404 447 - -
Mal4g1311 447 MobiDBLite consensus disorder prediction 150 166 - -
Mal4g1311 447 MobiDBLite consensus disorder prediction 126 147 - -
Mal4g1311 447 Gene3D WRKY domain 178 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal4g1311 447 ProSiteProfiles WRKY domain profile. 188 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal4g1311 447 SUPERFAMILY WRKY DNA-binding domain 186 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal4g1311 447 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 426 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1311 Mal-Chr4 19068676 19071044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1311 1 416 WRKY Transcription Factor Family AT1G62300 49.083 8.76e-120 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal4g1311 WRKY 1.6e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1311 4 19068676 19071044 Mal4g1311 4 19068676 19071044 ECH
Mal4g1311 4 19068676 19071044 Mal4g3216 4 94050103 94052536 ECH
Mal4g1311 4 19068676 19071044 Mal5g5516 5 129795347 129798034 ECH
Mal4g1311 4 19068676 19071044 Mal7g1737 7 59774437 59777684 PCT