Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1305 ATGGCGAAAACGATCTCGAACAACAAAATCAACCACCACAACAACAATAATAATAAGAATGTTGAGGTTGACATTGACTTTGACTCATCAAAAGATGATGTTGATGCAAGAACTGGCATGAAGAAGGGACCGTGGACCCCACATGAAGACATGATATTGATAGAGTACGTGAATAAGCATGGTGAAGGGAATTGGAATTCTGTTCAGAAGAATTCAGGATTGTTAAGGTGTGGAAAAAGCTGCAGACTTAGATGGGCTAATCATCTAAGGCCGAATCTTAAAAAGGGTTCCTTTACTGATGAGGAAGAAAATATCATCATTGAGCTTCATGCTAAACTAGGAAACAAATGGGCTCGAATGGCTGCTCAGTTGCCAGGAAGAACAGATAACGAAATCAAAAATTTCTGGAACACTAGAGTGAAAAGGCGCCAGAGAGCAGGGTTACCTATCTATCCTCCAGAAATCCAAGCAGAAGCTATTGCATACAATAATCAACTAATGCAACAACACCATGAGCCTTTATCTTCTACATCATTATCATTTTCTTTACTCTTATCTTCTTGTTACCCTAAGAAGCTTGATGATCCAAACCATTATGATTATAATCCTCCACAAAACAACTCTGGTTCTTCTAACCATTACACCAATCCATGTCCACAATTCAACTTTTCCAATGATGAAAACATTGAGATTAATGAAACCCTTGATTTGCAAAATTCACCTTCACTTTCACCTTATCCATCTTCATCATCAAATCTTTTCAACCAGAGTCTTACTCCTCCAAGTGAGTCACAAGATTACCAATATTCTGAAAATTTGAGCTATGATCATCATGGCTTCATTGCAGGATCTCTGTATGATTCAGAAACTCCTGCTTCATCTTATGCTAGTGGTGTTGATGGTAATTTGATGGGGAATTCAAGCATTGTCAATGATTACTATGAAGTTGCACCATTATCACATGAAGGAAAAAATAGTGGACTTTTGGATGATCTTGTGATGGAAGGTAGAATTATTTCTTGCAATGGTAAGGCTAAGAGTGAAGATTCAACATATAAGGGGAACATATCTCATAAGAGGAAAACCATGGAGGGTGAAGAATATGAGGAGGAAGGCATTGTTCCTTTGGTGTCAGCCATGAAGAAGAAGAGTATTGATGAGAGTCACAAGAAAGATTTTAGCTCTTCTCAATTGTCAACAGGGAAGAAACCGGTCGTGGAGGATCAACTAGAAGAGATGAATACAATGTACGATGATGACTTGGATTGCTTACTCAACAATTTCCCCTCTGAAATTCCAATGCCTGAATGGTATTGTAGAGGAAAAAGCCAGTCATTGGAACTTGAAAATCAAACTGATCAAGCTTCTTCATCAGGTGGTCCCACCAATCAAGAATTTGCTTGGACTCTTGGATCAAATTGGAACAACATGCCTGGCATATGTTAA 1446 0.3838 MAKTISNNKINHHNNNNNKNVEVDIDFDSSKDDVDARTGMKKGPWTPHEDMILIEYVNKHGEGNWNSVQKNSGLLRCGKSCRLRWANHLRPNLKKGSFTDEEENIIIELHAKLGNKWARMAAQLPGRTDNEIKNFWNTRVKRRQRAGLPIYPPEIQAEAIAYNNQLMQQHHEPLSSTSLSFSLLLSSCYPKKLDDPNHYDYNPPQNNSGSSNHYTNPCPQFNFSNDENIEINETLDLQNSPSLSPYPSSSSNLFNQSLTPPSESQDYQYSENLSYDHHGFIAGSLYDSETPASSYASGVDGNLMGNSSIVNDYYEVAPLSHEGKNSGLLDDLVMEGRIISCNGKAKSEDSTYKGNISHKRKTMEGEEYEEEGIVPLVSAMKKKSIDESHKKDFSSSQLSTGKKPVVEDQLEEMNTMYDDDLDCLLNNFPSEIPMPEWYCRGKSQSLELENQTDQASSSGGPTNQEFAWTLGSNWNNMPGIC* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1305 481 MobiDBLite consensus disorder prediction 200 223 - -
Mal4g1305 481 CDD SANT 44 89 IPR001005 -
Mal4g1305 481 ProSiteProfiles Myb-like domain profile. 37 89 IPR001005 -
Mal4g1305 481 Pfam Myb-like DNA-binding domain 95 138 IPR001005 -
Mal4g1305 481 Pfam Myb-like DNA-binding domain 42 89 IPR001005 -
Mal4g1305 481 PANTHER MYB DNA-BINDING DOMAIN PROTEIN 29 457 - -
Mal4g1305 481 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 29 457 - -
Mal4g1305 481 Gene3D - 97 143 - -
Mal4g1305 481 CDD SANT 97 138 IPR001005 -
Mal4g1305 481 SUPERFAMILY Homeodomain-like 39 136 IPR009057 -
Mal4g1305 481 Gene3D - 41 94 - -
Mal4g1305 481 MobiDBLite consensus disorder prediction 196 223 - -
Mal4g1305 481 MobiDBLite consensus disorder prediction 237 267 - -
Mal4g1305 481 SMART sant 94 142 IPR001005 -
Mal4g1305 481 SMART sant 41 91 IPR001005 -
Mal4g1305 481 ProSiteProfiles Myb-like domain profile. 90 140 IPR001005 -
Mal4g1305 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 144 IPR017930 -
Mal4g1305 481 MobiDBLite consensus disorder prediction 1 22 - -
Mal4g1305 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 89 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1305 Mal-Chr4 18905123 18908348 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1305 39 481 MYB Transcription Factor Family AT2G32460 38.235 1.26e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal4g1305 Myb_DNA-binding 4.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1305 K09422 - gmx:100784779 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1305 4 18905123 18908348 Mal4g1305 4 18905123 18908348 ECH