Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1289 ATGAAGCAGTTTATGGTTTTGTACCTTATGATTTGGATTTGGGTAATTTTCCTTTGTGGTATTGCTCATAGTGAAAGGCCTGAAAGTGTGAACATTGGAGCAGTTTTCACCTTTGATTCTGTCATAGGTAGAGTTGCAAAGGTAGCTATGGAAATGGCTGTTTCTGATATCAATTCTGACCCAACAATTCTTAGTGAGACTAAGCTCAACTTGATAATGAAAGATGGTATGTGTAATGCCTTTTTGGGATCAACTGGAGCTTTTCAGGTACTTGAGCAAGGGGTGGCGGCCATAATTGGTCCACAATCATCCGCCATAGCTCATTCAATTTCTCAAATAGCAGATGCAGTCCATGTTCCCCTTATTTCATATGCCGCAACTGATCCAACCCTATCATCCCTTCAATTTCCTCTCTTTTTCCGAACCATACAAAGTGACTCAGAGCAAATGGCTGCAATGGCCAATCTAATTGATTTTAACGGATGGAAAGAGGTCATTGTTATATTCTTGGATGACGATTATGGAAGAAACGGAATATCTGCTTTGAGTGATGAACTTGAAAAAAGGAGATTGAAACTAGCTCACAAACTAGCTTTAAGTATTCACTTTGATCTAGATGAAATCACTAAGCTGCTCAATCAATCCAGAGTATATAGTCCTCGTGTTTTTGTCGTTCATGTTAACCCGGATCCGAGATTGAGAATTTTTTCCATTGCTCGCAAACTTCAAATGATGACTATTGACTATGTATGGCTTGCCACAGATTGGCTCTCTGCTACCTTACATTCATTTTCACCAGCGAATCAGAAATCTCTTAGCGTTGTCGAAGGAGTTGTTGGTCTTCGTCAACACATTCCGGATTCTAGAAAAAAAAGAGCTTTTATTTCTCGATGGAAAAAAATGCAAAAAGGTGTAGCAAATACTAGTTTGAACTCCTATGGATTTTTCGCTTACGATACAGTTTGGACAGTTGCACATTCAATTGATAAATATTTGAAAGTATATAATAATATTACTTTCTCTCTTCATGATAACAATATGGTACCTCATACGGAAGGAATTGGCATTCAGCTTGAGAAGCTCAAAGTCTTTGCTGGTGGATCTGATCTTGTTAACATATTATTGCAGTCAAACTTTAGCGGCCTGAGTGGTCAAATTCGGTTTAGTTTGAACAGAAATATCATTAGTAGTGGCTATGATGTTATCAATATCAATCAGATGAAAATTAATAGGGTTGGTTATTGGTCTAATCATTCAGGATTTTCAATTGTACCTCCCGAAGTTCTTGCGAAAAAGGATCGCAGGGTTTCCGTAGATCAGAAGCTTGGCAATATAACTTGGCCAGGTGGGAAAACAGAACGACCGCGTGGCTGGGTGATTGCTGATAATGCGAAGCCGTTGAGAATTGGAGTGCCAAAGAGAGCAAGTTTTGTTGAATTTGTAACTGAAGTGCAAGAGAGTCATCGGATGCAAGGGTATTGTATCGATATCTTCATGAAAGCCTTGGAATTTATTCCGTATGAAATTCCTTTTGTATTCAAGCCTGTTGGAAACGGTAAAGCAAATCCAAATTATGATGCACTTGTCAAAAAGATTGATGAAAATGTATATGATGCAGTTGTTGGAGACATTGCGATTGTGACAAACCGCACAAAAATTGCAGACTTTTCTCAGCCTTTTGCATCGTCAAGCCTTGTTGTAGTGGCTCCGATCAACAGTTCAAAATCAAATGCTTGGGTATTCCTTAAACCATTCTCTGCAGATATGTGGTGTATTATTATTGCATCATTTATGATGATTGGAGTGGTTATATGGATTCTTGAACACCGAGTCAACGATCACTTCCGTGGTCCTCCTAAGAGACAACTTGTGACAATGTTCATGTTTAGCCTCTCAACACTGTTTAAGACAAATAATAATACCGTAAGCTCACTTTCTAAAATGGTGTTGATAGTATGGCTCTTCCTACTGATGGTGATCACTGCTAGCTATACAGCAAGCTTGACTTCAATTCTCACAGTGGAGCAGCTTTCATCACCGATCACAGGAATCGATAGTTTGATTGCAAGTAACTGGCCTATTGGATACCAAGTAGGGTCATTTGCTTACAGCTATCTGACAGATAATCTTTATGTATCAAGATCAAGACTTGTTTCCTTAGGCTCCCCTGAGGAATATGCTGTAGCACTTCGGAATGGACCATCCGGTGGTGGCGTAGCAGCTATCGTAGATGAGCTTCCATATGTTGAGCTATTTCTGTCAAAAGAAACTGATTTCGGTATTATTGGTCAGCCGTTTACTAGAAGCAGTTGGGGATTTGCTTTTCAAAGAGAGTCTCCTCTTGCACTTGACATGTCAACTGCGATTTTGAAACTAGCTGAGACTGGAGAGCTTCAAAAGATACATGAGAAATGGTTTTGCAAGATGGGTTGTCCTAGTGAAAGGAAAAGCGACCCTAAACCCGATCAACTTCACCTTATCAGCTTTTGGGGTCTATATCTCTCGTGTGGCATCATCTCTGTCGTCGCGCTTGTTGTGTTTCTGCTGCGAATGATTAGCCAATATGTTGGCTTCACACAAAGACAAAAGGACGTTGTTGTTTCATCGTCAGAACCATCGGAAAGTCACTGTTCGCGGGTTGTTGTTAACTTCTTTAACTTCATTGATAAAAAGGAAGAAGCCATCAAGAAAATGTTCACTCAATGTGACAATCCTCATAATCCCAACTCAGAATCATGA 2739 0.3969 MKQFMVLYLMIWIWVIFLCGIAHSERPESVNIGAVFTFDSVIGRVAKVAMEMAVSDINSDPTILSETKLNLIMKDGMCNAFLGSTGAFQVLEQGVAAIIGPQSSAIAHSISQIADAVHVPLISYAATDPTLSSLQFPLFFRTIQSDSEQMAAMANLIDFNGWKEVIVIFLDDDYGRNGISALSDELEKRRLKLAHKLALSIHFDLDEITKLLNQSRVYSPRVFVVHVNPDPRLRIFSIARKLQMMTIDYVWLATDWLSATLHSFSPANQKSLSVVEGVVGLRQHIPDSRKKRAFISRWKKMQKGVANTSLNSYGFFAYDTVWTVAHSIDKYLKVYNNITFSLHDNNMVPHTEGIGIQLEKLKVFAGGSDLVNILLQSNFSGLSGQIRFSLNRNIISSGYDVININQMKINRVGYWSNHSGFSIVPPEVLAKKDRRVSVDQKLGNITWPGGKTERPRGWVIADNAKPLRIGVPKRASFVEFVTEVQESHRMQGYCIDIFMKALEFIPYEIPFVFKPVGNGKANPNYDALVKKIDENVYDAVVGDIAIVTNRTKIADFSQPFASSSLVVVAPINSSKSNAWVFLKPFSADMWCIIIASFMMIGVVIWILEHRVNDHFRGPPKRQLVTMFMFSLSTLFKTNNNTVSSLSKMVLIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSFAYSYLTDNLYVSRSRLVSLGSPEEYAVALRNGPSGGGVAAIVDELPYVELFLSKETDFGIIGQPFTRSSWGFAFQRESPLALDMSTAILKLAETGELQKIHEKWFCKMGCPSERKSDPKPDQLHLISFWGLYLSCGIISVVALVVFLLRMISQYVGFTQRQKDVVVSSSEPSESHCSRVVVNFFNFIDKKEEAIKKMFTQCDNPHNPNSES* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1289 912 PIRSF IGluLR_plant 1 912 IPR017103 -
Mal4g1289 912 Pfam Ligand-gated ion channel 807 837 IPR001320 GO:0015276|GO:0016020
Mal4g1289 912 PANTHER GLUTAMATE RECEPTOR 3.7 12 907 - -
Mal4g1289 912 CDD GluR_Plant 465 806 - -
Mal4g1289 912 SUPERFAMILY Periplasmic binding protein-like II 445 806 - -
Mal4g1289 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 43 59 - -
Mal4g1289 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 103 131 - -
Mal4g1289 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 317 329 - -
Mal4g1289 912 Pfam Bacterial extracellular solute-binding proteins, family 3 483 806 IPR001638 -
Mal4g1289 912 SUPERFAMILY Periplasmic binding protein-like I 26 449 IPR028082 -
Mal4g1289 912 SMART GluR_14 468 808 IPR001320 GO:0015276|GO:0016020
Mal4g1289 912 Gene3D - 754 813 - -
Mal4g1289 912 Gene3D - 462 577 - -
Mal4g1289 912 Gene3D - 145 421 - -
Mal4g1289 912 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 12 907 - -
Mal4g1289 912 Pfam Receptor family ligand binding region 48 405 IPR001828 -
Mal4g1289 912 Gene3D - 578 707 - -
Mal4g1289 912 CDD PBP1_GABAb_receptor_plant 31 425 IPR044440 -
Mal4g1289 912 Gene3D - 48 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1289 Mal-Chr4 18630079 18635071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1289 15 907 Ion Channels AT2G32400 54.889 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1289 K05387 - gmx:100784247 1439.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1289 4 18630079 18635071 Mal4g1289 4 18630079 18635071 ECH