Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1285 ATGTTCCAGCCAAATCTAATGGAAGCTGGACAACAACATCATCAACTTCTACCATTTGACATGACACAAAACAACAACAACAACACTTCAGAAAGTGATGTTCCAAGAATTCGTGAAGATGAATTATTCGACAGTGCTACAAAATCTGGTAATAGTGAAAATCAAGAAGCTGCTAATTCAGGTGAAGATCAAGAGCCTCGTGCTAAGAAGAAACGTTACCACCGTCATACACAACATCAGATCCAAGAAATGGAAGCTTTTTTTAAGGAATGTCCACACCCTGATGACAAACAAAGGAAGGAACTAAGCAGGGAGTTAGGGTTAGAGCCATTACAAGTGAAGTTTTGGTTTCAGAACAAACGTACTCAAATGAAGACTCAGCAAGAGAGGCATGAGAATACTTCACTTAGAACTGAGAATGATAAGCTTCGTGCTGATAACATGAGGTTTAGAGAAGCTCTTAGTAATGCTTCTTGTCCTAATTGCGGCGGACCAACTGCTATCGGAGAAATGTCGTTTGATGAACATCATTTGAGGCTGGAAAATGCTCGCCTTAGAGAAGAGATTGATAGGATCGCTGGCATTGCTGCGAAGTACGCAGGGAAGGCAGTGGTGAGCTATCCACTACTTTCTCCTTCATCGGTTCCTCCACGTCCTCTAGAACTCGGCATTGGTGGTTTTGGAGGACAACCAGGAATCGGAGGAGGAGATATGTATGGAGCTGGAGATCTTCTTAGATCAATTAGTGGACCAACCGAAGCCGATAAACCAATGATAATTGAGCTAGCTGTTGCTGCTATGGAGGAACTCATTGGAATGGCACAAATGGGTGATCCTCTTTGGTTGACTACACTTGAAGGTGGTTCCATACTCAATGAAGAGGAATATGTTAGGTCTTTTCCTAGAGGAATTGGTCCAAAACCAGCTGGTTTTAAGTGTGAAGCTTCAAGAGAAACTTCTGTTGTCATCATGAATCATGTTAACCTTGTTGAGATTCTCATGGACGTGAACCAATGGTCCACAGTTTTTTCTGGAATTGTCTCAAGAGCTATGACATTGGAAGTGCTATCAACTGGGGTGGCAGGGAACTACAATGGTGCATTACAAGTGATGACAGCAGAATTACAAGTACCTTCACCACTTGTGCCAACTAGAGAGAGTTATTTTGTAAGGTATTGTAAGCAACATGCTGATGGAACTTGGGCAGTAGTGGATGTTTCTTTGGACAATTTACGCCCTAGTCCTTCTGCAAGATCTAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAAATGCCCAATGGCTACTCTAAGGTTATATGGGTTGAGCATGTAGAAGTGGATGATAGAGGTGTTCATAATCTATACAAGCAGCTTGTTAGTTCTGGACATGCATTTGGTGCAAAACGTTGGATTGCAACTTTAGATAGACAATGTGAAAGACTTGCTAGTGCCATGGCAACAAACATTCCCACAGTCGATGTTGGCGTGATAACAAACCAAGATGGGAGAAAGAGTATGTTGAAACTAGCTGAAAGAATGTGCATAAGCTTTTGTGCTGGAGTGAGTGCTTCAACAGCTCACACGTGGACAACACTTTCGGGTACAGGAGCTGATGATGTAAGGGTGATGACCCGTAAGAGTGTAGATGACCCAGGAAGACCAGCTGGCATTGTTCTAAGTGCTGCAACTTCTTTTTGGCTTCCAGTTCCACCAAAAAGAGTTTTTGAATTTCTTAGAGATGAAAACTCAAGAAGTGAGTGGGATATTCTTTCCAATGGTGGAGTTGTCCAAGAAATGGCACATATTGCTAATGGACGAGATACTGGAAATTGTGTTTCTCTACTTCGAGTGAATAGTGCAAATTCTAGCCAAAGCAACATGCTGATATTACAAGAGAGTTGCACGGACACAACTGGGTCATTCGTTATATACGCACCTGTGGACATAGTTGCAATGAACGTGGTTTTAAATGGAGGGGATCCCGATTATGTAGCGCTTCTTCCATCTGGATTTGCAATACTTCCAGATGGGACAACAACAACAACATCACATGGAGGTGGTGGTGGTGGCGAAATCGGACATGGTGGTGGATCTCTATTGACAGTTGCATTTCAAATATTGGTTGATTCTGTTCCAACCGCAAAACTTTCTCTTGGATCAGTTGCTACTGTTAATAATCTCATTGCTTGTACTGTTGAGAGGATTAAGGCTTCTTTGTCTGGTGAAGTTGCTTGA 2235 0.4237 MFQPNLMEAGQQHHQLLPFDMTQNNNNNTSESDVPRIREDELFDSATKSGNSENQEAANSGEDQEPRAKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENTSLRTENDKLRADNMRFREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRIAGIAAKYAGKAVVSYPLLSPSSVPPRPLELGIGGFGGQPGIGGGDMYGAGDLLRSISGPTEADKPMIIELAVAAMEELIGMAQMGDPLWLTTLEGGSILNEEEYVRSFPRGIGPKPAGFKCEASRETSVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARSRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDVGVITNQDGRKSMLKLAERMCISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPAGIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTTTTSHGGGGGGEIGHGGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEVA* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1285 744 ProSiteProfiles START domain profile. 252 483 IPR002913 GO:0008289
Mal4g1285 744 CDD homeodomain 70 128 IPR001356 GO:0003677
Mal4g1285 744 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 23 741 IPR042160 -
Mal4g1285 744 SMART HOX_1 68 131 IPR001356 GO:0003677
Mal4g1285 744 MobiDBLite consensus disorder prediction 19 79 - -
Mal4g1285 744 Pfam Homeodomain 70 125 IPR001356 GO:0003677
Mal4g1285 744 Gene3D - 307 477 IPR023393 -
Mal4g1285 744 Pfam START domain 262 480 IPR002913 GO:0008289
Mal4g1285 744 ProSiteProfiles 'Homeobox' domain profile. 67 127 IPR001356 GO:0003677
Mal4g1285 744 Gene3D - 54 143 - -
Mal4g1285 744 SUPERFAMILY Homeodomain-like 61 128 IPR009057 -
Mal4g1285 744 SUPERFAMILY Bet v1-like 500 736 - -
Mal4g1285 744 SUPERFAMILY Bet v1-like 252 482 - -
Mal4g1285 744 SMART START_1 261 480 IPR002913 GO:0008289
Mal4g1285 744 CDD START_ArGLABRA2_like 256 479 - -
Mal4g1285 744 ProSitePatterns 'Homeobox' domain signature. 102 125 IPR017970 GO:0000981|GO:0006355
Mal4g1285 744 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 23 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1285 Mal-Chr4 18601332 18606193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1285 1 744 Homeobox Transcription Factor Family AT1G05230 76.070 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal4g1285 START 2e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1285 K09338 - gmx:100809556 1262.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1285 4 18601332 18606193 Mal4g1285 4 18601332 18606193 ECH
Mal4g1285 4 18601332 18606193 Mal7g1672 7 57446755 57452552 PCT