Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1279 ATGAACGACCTTCTCACTGATTCATTTGTTAGTGAGGCCAATAATGGCCAGCCTTCTAGACAAGGGGATATCGAAATGGGAATGCAGGTTCAAAGAAGCAACTCTGATATGGGAATGGAAACTTTTAATAAACAGATCCAAGATGCTGATAAGCAAATCGAGAAGCTGTCTGCGCTACTTCAAAAGCTAAAGGAAGCTAATGAGGAATCAAAAGCTGTTACAAAAGCTTCTGCCATGAAAGCTATCAAAAAGAGGATGGAGAAAGATATTGATGAAGTTGGAAAGATTGCACATGGGGTCAAATCAAAAATAGAAGCTATCAACAGAGAAAATCTAAACAATAGACAAAAGCCTGGCTGTGAGAAAGGAACCGGTATTGACAGAGCAAGAATGAATATGACCAATTCATTGACTAAAAAGTTCAGGGATCTCATGACAGAGTTTCAGACTCTCAGACAAAGAATACAAGATGAATATCGTGAGGTTGTGGAGAGAAGAGTTATTACAGTCACGGGAACTAGGCCAGATGATGAGACGATTGACCACCTGATAGAAACTGGAAACAGTGAGCAAATCTTTCAGCAGGCAATTCTTGAAGCAGGCCGAGGACAGGTTGTGAGCACTGTAGAAGAAATTCAGGAGAGACATGATGCTGTGAAAGAAATTGAGAAAAAACTTCTTGATTTACATCAGATTTACCTTGACATGGCAGTCTTAGTTGATGCTCAAGGAGAAATTTTAGACAACATCGAAAGCCAGGTCAACAATGCAGTCGATCATGTCCAGAGAGGGACAACTGCACTTCAAAGTGCTAAGAAACTCCAGAAGAATTCTCGAAAATGGATGTGCATTGCCATCATCATCCTGTTAATAATAGTAGCTATCATAGTTGTTGGCGTTCTCAAACCTTGGAAGAGTTCTTAG 924 0.4015 MNDLLTDSFVSEANNGQPSRQGDIEMGMQVQRSNSDMGMETFNKQIQDADKQIEKLSALLQKLKEANEESKAVTKASAMKAIKKRMEKDIDEVGKIAHGVKSKIEAINRENLNNRQKPGCEKGTGIDRARMNMTNSLTKKFRDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDHLIETGNSEQIFQQAILEAGRGQVVSTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVDAQGEILDNIESQVNNAVDHVQRGTTALQSAKKLQKNSRKWMCIAIIILLIIVAIIVVGVLKPWKSS* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1279 307 MobiDBLite consensus disorder prediction 1 25 - -
Mal4g1279 307 CDD SNARE_syntaxin1-like 208 269 - -
Mal4g1279 307 Gene3D - 34 163 - -
Mal4g1279 307 SUPERFAMILY t-snare proteins 36 264 IPR010989 GO:0016020|GO:0016192
Mal4g1279 307 Coils Coil 39 76 - -
Mal4g1279 307 SMART SynN_4 34 160 IPR006011 GO:0016020
Mal4g1279 307 PANTHER SYNTAXIN 10 301 IPR045242 -
Mal4g1279 307 Pfam Syntaxin 42 244 IPR006011 GO:0016020
Mal4g1279 307 CDD SynN 39 196 IPR006011 GO:0016020
Mal4g1279 307 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 10 301 - -
Mal4g1279 307 Gene3D - 203 302 - -
Mal4g1279 307 Pfam SNARE domain 245 297 IPR000727 -
Mal4g1279 307 SMART tSNARE_6 204 271 IPR000727 -
Mal4g1279 307 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 209 271 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1279 Mal-Chr4 18481184 18484468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1279 1 304 SNARE and Associated Proteins AT3G03800 62.171 3.56e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1279 K08486 - gmx:100800991 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1279 4 18481184 18484468 Mal4g1279 4 18481184 18484468 ECH