Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1277 ATGGCCAACGTGAATCGCAGCTCTGAGGAAGTTTCTGCTGATTCTTCTACAGCAGAGCAATCCAATTCCAGTAGTACTCAAGCAAATTCCAAGGTAGAGTTTTCTAAAGATGAGGAAGATCTTATCATCAGGATGTATAAACTAGTGGGGGATAGGTGGCCTTTAATTGCGGGAAGAATACCTGGAAGAACAGCTGAAGAAATAAAGAATTACTGGACTTCAAAATACTCTTCCACTAGCCAATGA 246 0.4106 MANVNRSSEEVSADSSTAEQSNSSSTQANSKVEFSKDEEDLIIRMYKLVGDRWPLIAGRIPGRTAEEIKNYWTSKYSSTSQ* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1277 81 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 8 79 - -
Mal4g1277 81 SMART sant 30 78 IPR001005 -
Mal4g1277 81 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 80 IPR017930 -
Mal4g1277 81 MobiDBLite consensus disorder prediction 1 31 - -
Mal4g1277 81 CDD SANT 33 72 IPR001005 -
Mal4g1277 81 ProSiteProfiles Myb-like domain profile. 26 76 IPR001005 -
Mal4g1277 81 SUPERFAMILY Homeodomain-like 33 76 IPR009057 -
Mal4g1277 81 Pfam Myb-like DNA-binding domain 31 73 IPR001005 -
Mal4g1277 81 MobiDBLite consensus disorder prediction 1 34 - -
Mal4g1277 81 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 8 79 - -
Mal4g1277 81 Gene3D - 33 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1277 Mal-Chr4 18470122 18470687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1277 34 77 MYB Transcription Factor Family AT5G14750 59.091 1.05e-16 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal4g1277 Myb_DNA-binding 5.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1277 - - mtr:MTR_2g088730 124.405