Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1275 ATGAAAATGAGAAATCAGAGTAATTACTTCAAGGTTTTGATTCTTTGTATTTTAGCAGCATCAACTCAAGCTCAATTGGAGCTAGGATTTTATACTAAGAGCTGTCCGAAAGCCGAACAAATCATTGCGAACTTTGTTCATGAACATATCCGCAATGCTCCATCACTTGCAGCTGCATTGATAAGAATGCACTTTCATGATTGCTTTGTTAGGGGATGTGATGGATCAGTTCTTCTGAACTCAACAAACAAACAAGCTGAAAAAGATGCTCCTCCAAATCTTACAGTTAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGTCCTGGTGTAGTCTCTTGTGCTGATATAATAGCTTTATCTGCTAGAGATTCTATTGCAGCCACTGGTGGTCCATATTGGAAAGTTCCAACAGGTAGAAGGGATGGAGTTATATCTAACTTGTTGGAAGCAAATCAAAACATTCCTGCTCCATTTTCAAACTTCACCACCCTCCAAACTCTCTTTGCCAATCAAGGACTTAATTTAAAAGACTTAGTCCTACTCTCTGGTGCTCACACAATTGGTATCTCCCTTTGCACATCATTTTCAAACCGTTTGTACAATTTTACCGGAAAGGGTGATCAAGATCCATCACTTGATAGTGAATATGCACAAAATCTAAAGACATTCAAGTGCAAGAACATCAATGACAATACTACAATAGTCGAGATGGACCCCGGAAGTCGAAACACATTTGATCTTGGTTATTATAGTCAAGTTGTCAAGAGAAGGGGTTTGTTTGAATCTGATTCTGCATTGTTGACAAATTCAGTTACAAAAGCTCTTGTGACTCAATTCCTTCAAGGATCACTTGAAAATTTCTATGCTGAATTTGCAAAGTCAATGGAGAAAATGGGACAAGTTAAAGTTAAGACAGGGTCACAAGGTGTGATTAGGAAGCATTGTGCACTTGTAAATAACTAA 981 0.3802 MKMRNQSNYFKVLILCILAASTQAQLELGFYTKSCPKAEQIIANFVHEHIRNAPSLAAALIRMHFHDCFVRGCDGSVLLNSTNKQAEKDAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADIIALSARDSIAATGGPYWKVPTGRRDGVISNLLEANQNIPAPFSNFTTLQTLFANQGLNLKDLVLLSGAHTIGISLCTSFSNRLYNFTGKGDQDPSLDSEYAQNLKTFKCKNINDNTTIVEMDPGSRNTFDLGYYSQVVKRRGLFESDSALLTNSVTKALVTQFLQGSLENFYAEFAKSMEKMGQVKVKTGSQGVIRKHCALVNN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1275 326 PANTHER PEROXIDASE 9 325 - -
Mal4g1275 326 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Mal4g1275 326 Pfam Peroxidase 43 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 SUPERFAMILY Heme-dependent peroxidases 25 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 Gene3D - 29 325 - -
Mal4g1275 326 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Mal4g1275 326 PANTHER PEROXIDASE 25-RELATED 9 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal4g1275 326 CDD secretory_peroxidase 25 324 IPR033905 GO:0004601|GO:0042744
Mal4g1275 326 Gene3D Peroxidase, domain 2 161 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1275 Mal-Chr4 18446234 18447832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1275 18 326 Peroxidase AT1G05260 68.932 7.81e-166 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1275 K00430 - gmx:100803114 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1275 4 18446234 18447832 Mal4g1275 4 18446234 18447832 ECH
Mal4g1275 4 18446234 18447832 Mal7g1654 7 56797717 56799312 PCT