Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1273 ATGGAACTCAACCTTGAAGGTCTCACGCTCGATGAAGGGGGAACTGCATTTTTTCCTTTGCAAAGCTGTTTGAACCATTCATGTTGTCCTAATGCTAAAGCTTTCAAAAGAGACGAGGATAGAGATGGCCAAGCAATAATAATTGCACTGAGGTCCATCAGTAAAGGAGAAGAGATAACCATTTCATATGTTGATGAGGACCTTCCATTTGAAGAGAGACAAACATCCCTTGCAGACTATGGTTTTAGATGTAGATGTCCAAAGTGCATTGAAGAAGAGCCATAA 285 0.407 MELNLEGLTLDEGGTAFFPLQSCLNHSCCPNAKAFKRDEDRDGQAIIIALRSISKGEEITISYVDEDLPFEERQTSLADYGFRCRCPKCIEEEP* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1273 94 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 93 IPR044237 GO:0008168
Mal4g1273 94 SUPERFAMILY SET domain 8 89 IPR046341 -
Mal4g1273 94 Pfam SET domain 11 63 IPR001214 GO:0005515
Mal4g1273 94 CDD SET_SMYD 9 89 - -
Mal4g1273 94 Gene3D SET domain 2 93 IPR046341 -
Mal4g1273 94 ProSiteProfiles SET domain profile. 1 64 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1273 Mal-Chr4 18408048 18409784 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal4g1273 SET 4.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1273 - - aip:107613919 159.844