Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1271 ATGGAACTCAACCTTGAAGGTCTCACGCTCGATGAAGGGGGAACTGCATTTTTTCCTTTGCAAAGCTGTTTGAACCATTCATGTTGTCCTAATGCTAAAGCTTTCAAAAGAGACGAGGATAGAGATGGCCAAGCAATAATAATTGCACTGAGGTCCATCAGTAAAGGAGAAGAGATAACCATTTCATATGTTGATGAGGACCTTCCATTTGAAGAGAGACAAACATCCCTTGCAGACTATGGTTTTAGATGTAGATGTCCAAAGTGCATTGAAGAAGAGCCATAA 285 0.407 MELNLEGLTLDEGGTAFFPLQSCLNHSCCPNAKAFKRDEDRDGQAIIIALRSISKGEEITISYVDEDLPFEERQTSLADYGFRCRCPKCIEEEP* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1271 94 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 93 IPR044237 GO:0008168
Mal4g1271 94 SUPERFAMILY SET domain 8 89 IPR046341 -
Mal4g1271 94 Pfam SET domain 11 63 IPR001214 GO:0005515
Mal4g1271 94 CDD SET_SMYD 9 89 - -
Mal4g1271 94 Gene3D SET domain 2 93 IPR046341 -
Mal4g1271 94 ProSiteProfiles SET domain profile. 1 64 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1271 Mal-Chr4 18383070 18384804 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal4g1271 SET 4.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1271 - - aip:107613919 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1271 4 18383070 18384804 Mal4g1271 4 18383070 18384804 ECH