Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1270 ATGGAACCTATTTGCCCTATCACCACGCGTTGTGCCAATGAAATCTCCACTCTTCTCTCTCCTCCCTCACCTCACCAACTTCAGGAATATTACCACAATATTTTCTCTTCAAGGACCTGCAATGGCATCACAATCAAACATGATGATAAACTTGGAAAAGGTGTGTATGCTGCAATGGACTTCAAAGAGGATGAACTTGTTCTCAAGGACCAAATGCTTGCTGGGACTCAACACTCTTTCAACAAGATTGATTGTTTTGTCTGTAGCTTTTGCTTTCGTTTTGTTGGTTCCATAGAAATTCAAATTGGTAGGAGGCTTTACTTGACAGAATTAAGGGCCAATGAGAGTCATGATTGTGATGTAGGAAGCTCTTCAAAGTCTTCAAATAACTGTCACGAAATGGATTCGTCTGATGAAGAGGAGAGCACTTGGCAATGTAGTTCAGGTAGTTCCAAAACTAAAGTTCCTCTACCTGAAGGTGTTGTTGAATCGTTGATGAATGGCCAATTGAAATTGCCTTTCTCTGAGAAGTTCTCCTTGCCTCCAGCTGTTCCATGTCCTGGTGGATGTGGGGAAGCTTACTACTGCAGCATGTCATGTGCAGACGCTGATTGGGAGTCCTCCCATTCTTTACTCTGTACTGGTGAGAGTTCTGATCCAAGACGTAGGGAGGCACTCCTTAAATTCGTGAAACATGCTAATGAAACAAATGATATATTCCTCCTTGCTGCAAAGGTCATTTCTTCTACCATATTAAGGTACCGCAAGTTAAAAGCAAATTGTCTTGCAGAGAAAGAGAAATATGATGCATCCTGTGTTTCAAACCACTATAATTTCTCTCTTCTTGTGGAAGCTTGGAGACCTATATCAATGGGATACAAAAAAAGGTGGTGGGACTGCATTGCACTACCAGATGATATTGATTCTCCCGATGAAGCGTCATTCAGGATGCAAATTAAAGAGTTGGCATTTGAGTCTCTCCAACTTCTTAAGACAGCAATATTTGACAAGGAATGTGAGCCATTATTCTCCCTTGAAATCTATGGACATATCATTGGCATGTTTGAGCTGAATAATCTTGATTTGGTTGTTGGTTCTCCTGTGGAGGATTACTTTTTATACATCAATGATATGTCGAATCCTGATAAGGACGAAGCTGAGAAAATTACACAACCGATTCTAGATGCTCTAGGTGAAGACTATTCTACTTGTTGCGAAGGAACTGCATTTTTTCCTTTGCAAAGCTGTTTGAACCATTCATGTTGTCCTAATGCTAAAGCTTTCAAAAGAGACGAGGATAGAGATGGCCAAGCAATAATAATTGCACTGAGGTCCATCAGTAAAGGAGAAGAGATAACCATTTCATATGTTGATGAGGACCTTCCATTTGAAGAGAGACAAACATCCCTTGCAGACTATGGTTTTAGATGTAGATGTCCAAAGTGCATTGAAGAAGAGCCATAA 1464 0.4051 MEPICPITTRCANEISTLLSPPSPHQLQEYYHNIFSSRTCNGITIKHDDKLGKGVYAAMDFKEDELVLKDQMLAGTQHSFNKIDCFVCSFCFRFVGSIEIQIGRRLYLTELRANESHDCDVGSSSKSSNNCHEMDSSDEEESTWQCSSGSSKTKVPLPEGVVESLMNGQLKLPFSEKFSLPPAVPCPGGCGEAYYCSMSCADADWESSHSLLCTGESSDPRRREALLKFVKHANETNDIFLLAAKVISSTILRYRKLKANCLAEKEKYDASCVSNHYNFSLLVEAWRPISMGYKKRWWDCIALPDDIDSPDEASFRMQIKELAFESLQLLKTAIFDKECEPLFSLEIYGHIIGMFELNNLDLVVGSPVEDYFLYINDMSNPDKDEAEKITQPILDALGEDYSTCCEGTAFFPLQSCLNHSCCPNAKAFKRDEDRDGQAIIIALRSISKGEEITISYVDEDLPFEERQTSLADYGFRCRCPKCIEEEP* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1270 487 MobiDBLite consensus disorder prediction 117 136 - -
Mal4g1270 487 Pfam MYND finger 185 213 IPR002893 -
Mal4g1270 487 ProSiteProfiles SET domain profile. 41 457 IPR001214 GO:0005515
Mal4g1270 487 SUPERFAMILY SET domain 33 482 IPR046341 -
Mal4g1270 487 Gene3D SET domain 381 486 IPR046341 -
Mal4g1270 487 SUPERFAMILY HIT/MYND zinc finger-like 188 214 - -
Mal4g1270 487 CDD SET_SMYD 396 482 - -
Mal4g1270 487 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 486 IPR044237 GO:0008168
Mal4g1270 487 SMART set_7 41 463 IPR001214 GO:0005515
Mal4g1270 487 Gene3D - 109 218 - -
Mal4g1270 487 Pfam SET domain 52 456 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1270 Mal-Chr4 18352859 18380836 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal4g1270 SET 1.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1270 - - gmx:100803651 816.609