Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1266 ATGTCACACTCAACCTACCTTGCTTGTTGCTACTATATCAACGTCTTGGGGGTGGGGGGATTCCACATTCTTGGTTTGGGTGAGGAGCAAAGCAGTTCAGATTACAGAAGCTGTATTCCATCCAATCCATCCAATCCGATCCGATCCAATCCAATCCAATCCAATTCATTCCATTTCATTTCATTTTATTCCATCAGAGCTGTGGTTTACTGCAAGCCTGATTCTGCTCGTCTTTGCATGCATTGTGATGGGATTGTACACTCTGCCAATTCTCTGTCTCGCAGGCATCCCCGCTCGCTCCTCTGCGATAAGTGTCATTTCGACTCAGCAATCGTACGCTGCGTCGAACATAAACTGTCTCTCTGTCAAGTTTGTGATTGGAATACAAATGACTGTTTTGTATTGGGACATAAACATGTGCTACTCACTTTCTACACTGGTTGTCCCTCTTTGGCAGAGTTATCTAAGATTTGGCCACATTTTGTTGATCCAAATTCATCAAATGCTGCTTGGGAATCACCTAGTACTAGTGCTTTGCCTAAAATTGAAAGCAGTGCCGGCCGCGGTCAGCATTTGGAGCAGCAACCTGAAAAGAATGGCTTCGTTGGTTTGGCGAATGACAAGTTGGGCGAAGGAGAACCGTGTGTCAAATATGAACCTTGGATTGGGAAATCTCCTATCATTCCATCAAATTCAAACTGCACACAATACTCCAAAGATCAAGCATTTTTATTTAATCAAGACTCAAACCAACCGAAGCTTCAAGGATGCCCTGATGTTAAGGATCTAATAATTCATGAGGGAACCAGTCTCTGTGAAGGTTTCAATGTGGATGATGTTCAATTAAACTTTGAAAGTGCTGATGAAATAATATTTGACTGCTCTCAAACTGCCACAAAATACAACCATGAAGATGGAGGAATAGAATGTCTATTAATGGATAAAAACAATCCAGTCACAAAATGTAGCAGTCACATTGAGACTGCGGCTTCTTCATCAGTTCAACAAGATTGTGTGATTTTTCCATCATCAGGGGCTGGTGGATCAACAAGTTTGATGCAGGGCATCAACAATACTGCAAATTGTGCACTTATAACTCCTAGCTGCAATAATAGCATGCCTCTAGGATTTCCTCATAGTCAAATTCATTCAGGCATATCAATTCAATTACCTAACATTAATGCTGAAAGCAATGTTACTGAACTTCTAGATTGTGGGTTACCTCGAGTGTTTCATCCTGGTGAATCCCCTTGGGAATCAAATTTGGAGAGTACATGTCCTCAAGCAAGGGATAAAGCCAAAATGAGATACCAAGAGAAAAAGAAAACTCGAACGTTCGGTAAGCAAATAAGATATGCGTCTCGCAAAGCAAGGGCTGATACAAGAAAACGTGTGAAAGGCAGATTTGTTAAAGCAGGCGAAGCATATGACTATGATCCTCTTTTGAGCGACAACTAA 1458 0.415 MSHSTYLACCYYINVLGVGGFHILGLGEEQSSSDYRSCIPSNPSNPIRSNPIQSNSFHFISFYSIRAVVYCKPDSARLCMHCDGIVHSANSLSRRHPRSLLCDKCHFDSAIVRCVEHKLSLCQVCDWNTNDCFVLGHKHVLLTFYTGCPSLAELSKIWPHFVDPNSSNAAWESPSTSALPKIESSAGRGQHLEQQPEKNGFVGLANDKLGEGEPCVKYEPWIGKSPIIPSNSNCTQYSKDQAFLFNQDSNQPKLQGCPDVKDLIIHEGTSLCEGFNVDDVQLNFESADEIIFDCSQTATKYNHEDGGIECLLMDKNNPVTKCSSHIETAASSSVQQDCVIFPSSGAGGSTSLMQGINNTANCALITPSCNNSMPLGFPHSQIHSGISIQLPNINAESNVTELLDCGLPRVFHPGESPWESNLESTCPQARDKAKMRYQEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLLSDN* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1266 485 ProSiteProfiles CCT domain profile. 430 472 IPR010402 GO:0005515
Mal4g1266 485 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 66 484 - -
Mal4g1266 485 Pfam CCT motif 430 472 IPR010402 GO:0005515
Mal4g1266 485 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 66 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1266 Mal-Chr4 18308747 18312966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1266 66 480 C2C2-CO-like Transcription Factor Family AT3G21880 36.779 2.96e-76 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal4g1266 CCT 2.1e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1266 - - mtr:MTR_2g088900 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1266 4 18308747 18312966 Mal4g1266 4 18308747 18312966 ECH