Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1254 ATGGACCCAAATTCACACCCTCTCTTTTCCAGCAACACTCCCTCCTCCACCATTGACCCATTGTTCTCCAACTTCCCCTTCCAATCTCTTCTCTCTTTCAATCCTCCCTTCTTCTCCGACGATTCACCTCCTCTCTCTAACTTCACTGAATCCTTAACCGACCAAATTCCAAACCTTTTCAACAACAACCTTAACAACAACGAAAAACACTACCTTGTTCCAAAACCAGAACACCCTTTTCAACTAGAACAATTTCTCCCACAACAACAACAACCCTTCAACTTCTTCCCAAAATACCTTCCACCTTTTGAATCTCTCCACCGTCTCCCTCATCTCCGTTCACCGGAACCCTCTACCAGAAAACGCCTCCACCACCTCACACTAGAAACACCACCACCACAACCTTTGATTCCTCAAAGCAACTTAGCAAGACAAAGAAGACTCACACTAAGCGAGAAAACACGTTGTCTTCAAAAACTAATGCCATGGGACAAGAAAATGGATCAAGCTACTCTTTACGAAGAAGCTTACAAATATGTTAAGTTTTTGCAAGCACAGTTATCTGTTCTTCAAGCAATGCCTTCTCACAGTTATGGCTACGGTTGCTCCGCCGATTCTGATGGTGTTTTTGGTGACTTGGAGAAGCTGAACAGAAACCAAGCTTTGCAGGTTCTGGTGAACTCACCGGTTGCACAAACCAAGCTTTGTTCACAAGGTTACTGTGTTTTCTCCATGGAACAGTTTTCTCTGCTGAAGAAATTATCAGAGAAAAGAGAACAACAGAGTTTTTCTGAACAAGGTTCTTCCAAAACTTTCTTTCACTGA 825 0.4303 MDPNSHPLFSSNTPSSTIDPLFSNFPFQSLLSFNPPFFSDDSPPLSNFTESLTDQIPNLFNNNLNNNEKHYLVPKPEHPFQLEQFLPQQQQPFNFFPKYLPPFESLHRLPHLRSPEPSTRKRLHHLTLETPPPQPLIPQSNLARQRRLTLSEKTRCLQKLMPWDKKMDQATLYEEAYKYVKFLQAQLSVLQAMPSHSYGYGCSADSDGVFGDLEKLNRNQALQVLVNSPVAQTKLCSQGYCVFSMEQFSLLKKLSEKREQQSFSEQGSSKTFFH* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1254 274 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Mal4g1254 274 PANTHER TRANSCRIPTION FACTOR BHLH117 8 266 - -
Mal4g1254 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 144 195 IPR036638 GO:0046983
Mal4g1254 274 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 8 266 IPR045843 GO:0003700|GO:0006355
Mal4g1254 274 SMART finulus 140 189 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1254 Mal-Chr4 18207808 18208632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1254 146 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 46.364 1.02e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1254 - - cam:101498441 319.316