Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1252 ATGCACGTTCACATGAAAGCTGAGTTAAAAGCAACATCCATTTCCTTTCAAAACCCAACACTCTTCAACACACACCAAAACACTCATCCTCTTCCTGAACCAGAAGCACTTAAAGGGTGTCTTGGAAGCTTAGATGGAGCATGTATTGAAAAGCTCTTACTTCATTGTGCAAGTGCTTTGGAAAGCAATGACATAACCTTAGCTCAACAAGTTATGTGGGTCTTAAACAACGTTGCTTCACCATTAGGTGACACAAACCAAAGACTCACTTCATGGTTTCTTAGAGCATTAATCTCTAGAGCTTCAAGAATTTGTCCTACTTCAATGAATTTCAAAGGAAGTAACTACACAATTCAAAGAAGGTTGATGTCGGTTACCGAACTCGCCGGGTATGTTGATTTAATCCCTTGGCATAGGTTTGGTTTTTGTGCTTCCAACAATGAAATTTTTAAAGCAATTAAAGGTTTCAAAAGGGTACATATTTTAGATTTTAGCATAACACCTTGTATGCAATGGCCTACTTTTATAGATTCTTTGGCTAAATTACCAGAAGGTCCTCCTTCACTTAGAATCACAGTTCCATCTTTTAGGCCAATGGTTCCTCCTTTGGTTAATATTTCAATCCATGAAGTTGGTCAACGTTTAGGTAATTTTGCAAAGTTTAAGGATGTTCCTTTTGAATTTAATGTTATTGGAGATAATGTTTCATTGACATCTGAAGAATTAAGCAATATTGAATCAACAAGTTTTCATTTTGAATCAATGTTAAGTCTCTTGAATCCTAGTATGTTGAATCTTAGGGAAGATGAAGCTTTGGTTATAAATTGCCAAAATTGGCTACGTTATTTGTCTGATGATAGAAAAGGTCAAAATATTTCAATTAGAGATGCTTTTATGAATTTAGTTAAAGGACTTAACCCTCAAATTGTGCTATTGGTTGATGAGGATTGTGATCTTAGTGCATCAAGTTTAACATCAAGAATTACTGCTTCTTTTAACCATTTATGGATACCCTTTGATGCATTGGACACTTTTTTACCTAAAGATAGTTGTCAAAGGACAGAGTTTGAATCTGACATAGGACAGAAAATTGAGAACATTATAAGCTTTGAAGGGCATCAAAGAATTGAGAGATTGGAGTCAGGGATGCAAATGTCACAAAGAATGAAAAATGCTGGTTACTTTAGTGTTCCATTTTGTGATGAAACTATTTTGGAAGTTAAGGGTTTGCTTGATGAACATGCTAGTGGTTGGGGAATGAAAAGGGAAGAAAGCATGTTGGTTCTTACATGGAAAGGAAACAGTTGTGTGTTTGCGACCGCTTGGGTCCCTAGTGAAATTAGGGATGATATCGGTATGGATGCACACATTTCCTAA 1377 0.3595 MHVHMKAELKATSISFQNPTLFNTHQNTHPLPEPEALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNYTIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKAIKGFKRVHILDFSITPCMQWPTFIDSLAKLPEGPPSLRITVPSFRPMVPPLVNISIHEVGQRLGNFAKFKDVPFEFNVIGDNVSLTSEELSNIESTSFHFESMLSLLNPSMLNLREDEALVINCQNWLRYLSDDRKGQNISIRDAFMNLVKGLNPQIVLLVDEDCDLSASSLTSRITASFNHLWIPFDALDTFLPKDSCQRTEFESDIGQKIENIISFEGHQRIERLESGMQMSQRMKNAGYFSVPFCDETILEVKGLLDEHASGWGMKREESMLVLTWKGNSCVFATAWVPSEIRDDIGMDAHIS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1252 458 PANTHER OS05G0500600 PROTEIN 6 444 - -
Mal4g1252 458 Pfam GRAS domain family 50 442 IPR005202 -
Mal4g1252 458 ProSiteProfiles GRAS family profile. 40 443 IPR005202 -
Mal4g1252 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 444 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1252 Mal-Chr4 18168844 18170220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1252 12 444 GRAS Transcription Factor Family AT3G49950 43.439 3.14e-118 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal4g1252 GRAS 2.6e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1252 - - gmx:100805056 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1252 4 18168844 18170220 Mal4g1252 4 18168844 18170220 ECH