Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1240 ATGAGAAACATTGTTCTGTTTTCCCTCCTTTTTTTTATGCTATTTTTTCAACTATGTTCAGCTACAGATACTTTAAACTTTGGCAAAAATATATCTCAGGACAACTCAAATAACCTTGTTTCACTTGGAAGAAAATTTCAACTGGGTTTTTTCTCCTTACCAATTGAAAGTGGTAGCAACACCAAGAATCTTAAAAAATACTTGGGAATATGGTATCACAATTTGAAACCACAAACAGTGGTATGGGTAGCCAACAGAAACAAACCTATTGTAGATTACAAAGGAGTTTTCCAAATTGCACATGATGGAAATCTGGTAGTTGCAGATTCATCAGAAAGTTATTGGTCCACAAAGTTAGAACCTTCCTCATCAAGATACAGGGTAGTGAAGCTCTTGGATTCAGGAAACCTTGTGCTTATGGATGATAATCATGGTTACTTGTGGCAGAGCTTTCAACATCCAACGGATACATTTCTTCCAGGTATGAAAATGAACACAAATTTAACGTTGCGTTCTTGGAAAAATGAGAATGATCCAGGAAATGGAAGCTTCACCTTTGAACTGGCGAAAACCGGAGACCCTCGAAGCTATAGAGTAAACAACCAGTCACAGCTTTATTGGGCATTTGATGGACACAATATTGATAAGATGTTCCAAAACATTCTTTACTTGTTGGAGAACTCCACCTCTAATTCGCCGCGCAAGTATAAATGGAGGTATAGAAACATAACCATCAAACAACAACCTCTTTTTAATTACGATAAATCGAGGTTGTTGATGAATTCTAATGGGGAGATACAATTTTGGAAGTGGATTGAAGACATTCAATGGGTTAAGGAGTGGTGGCGACCATCTGACATATGTGACATACATAACTATTGTGGTAACTTTAGCAGTTGCAACAAAAATAATAATTGGAAACCATGTAAGTGTTTGCCAGGATTTCGTCGCAGGTTGTCGAATAATGATCATGGCTACCTTGGAGAATACTTCCAAGGGTGTGTTAGAAAATCATCAACAAAGTGTGTCGCGACCGCTACAAACGATAACATGATATTCATCAACTTAACCAAGATAAATGTGGGAAACCCAGACCAAGGTTTCTTGACTGAAACAGAAGCAAATTGTCAATCTTTATGCCTTAGCATGTGTCCATGCAATGCTTATTCATATAATGCTACATATAGTGATCGTAGTTACTTTTCATGTTGGATATGGACTAGACCATTACCTACACTTCAAGAGGAGCAAGACGATGGTCGTGATTTTTCGGTCCTAGTCAAGAGTTCAGATATAGAATCAACGGCAAAATCGTGTGGACCTTGTGGCACATATATAATTCCTTATCCTCTAAGCACCGGGCCAAAATGTGGAGACCCTATGTACAACAAATTCAATTGTGACTTATTGACAGGCCAACTTAGTTTCATGATGCCAGATGGAAAATCTTATCGAGTTACCATGATTGATGAAGGTGGTAGAAAGTTTTATATCCAAACGAATGATACAAATTGTGGTGATTCCAGTTCCAAAATTTATCAAAATGATAAACCTAGTTCACCATTTAATGTGACTAATTGGTGTATTAAGGATGATGAAATTGAGGTCAATTGGGAACCAGCACCAGAACCACTTTGTGATGAGTATAATAGCTGCAAAAATTGGCCACATTCCACATGCATTGCAAAAAATGTAGGTGGAGAAAATAGGTGCCGATGTGACTCAAAATATTTGTGGAACCCCTCAAGTTTAAGATGTACCAAAGAATCATCAAGAAATCATTCAAGCTATCGAATGCCATTGACTATTGCAGTAATTTGTATAGTCATTATTATCCTAACATGTACAGTGGTGTTTGCTTATATACGGAGAAAGAAAATAGGCCACAAGCTTGATAATGTGAGCATTAGAATTCAGGAGAGCTTGAATGATAGTGAAAAACATGTGAAAAATTTGATTGGCTTAGGAAGTTTAGAAGAAAATGACAGTGAAAGCATTGAAGTACCTTATTATACTTTTAGAAGCATTCAAGCAGCTACAAATAATTTTTCAGAATCAAACAAGCTTGGACGAGGAGGTTATGGCCCTGTCTACAAGGGAAGGTTTCCCGGAGGTCAAGATATTGCTATAAAGAGGCTTTCGAGTGTTTCAACTCAAGGCTTACAAGAATTCAAAAACGAGGTTGTTTTGATTGCCAAACTTCAACATCGAAATCTTGTTAGGCTTAGGGGCTATTGCGTTAAAGGAGACGAAAAAATCCTACTATATGAATATATGTCAAACAAGAGCTTGGACACATTTATATTTGACCGATCACGAGCTGTACTTTTGGGTTGGAATTTGCGGTTCGACATTATTATAGGTATTGCCCGAGGGATGCTTTATCTCCATCAGGATTCAAGATTGAGAGTGATTCATAGAGACCTTAAAACAAGCAACATTCTTTTAGATGATGAGATGATTCCAAAGATATCAGACTTTGGTCTTGCCAAAATATTTGGGGGAAAAGAAACTGAGGCAAGCACACAAAGAGTAATGGGAACCTATGGATATATGGCTCCAGAGTACGCTTTGGATGGATTCTTTTCAATCAAATCAGATGTTTTTAGCTTTGGTATAGTCCTACTAGAGATTCTCAGTGGTAAAAAGAACACGGGTTTCTTTCGCTCACAACAAATTTCTAGCCTTTTGGGTTATGCGTGGAGATTATGGACAGAGAATAAGTTGCTGGATTTAATGGACTCAGCTCTTAGTGAAACTTGCAATGAGAATGAATTTATTAAGTGTGCACATATTGGGCTCTTATGCGTACAAGATGAACCTGGTGATCGACCCACCATGTTCAATATTTTGACAATGCTTGATAGTGAGACTGCAACAATCCCACTTCCAACACAACCAACTTTTTTTATGACCAAACACCAATCATCAAGTTCTTCTTCTAGCAAACTAGAAATAAGTATGCAATTTGATAGTAGTTATCAAGAAGGTCGCTAG 2997 0.3744 MRNIVLFSLLFFMLFFQLCSATDTLNFGKNISQDNSNNLVSLGRKFQLGFFSLPIESGSNTKNLKKYLGIWYHNLKPQTVVWVANRNKPIVDYKGVFQIAHDGNLVVADSSESYWSTKLEPSSSRYRVVKLLDSGNLVLMDDNHGYLWQSFQHPTDTFLPGMKMNTNLTLRSWKNENDPGNGSFTFELAKTGDPRSYRVNNQSQLYWAFDGHNIDKMFQNILYLLENSTSNSPRKYKWRYRNITIKQQPLFNYDKSRLLMNSNGEIQFWKWIEDIQWVKEWWRPSDICDIHNYCGNFSSCNKNNNWKPCKCLPGFRRRLSNNDHGYLGEYFQGCVRKSSTKCVATATNDNMIFINLTKINVGNPDQGFLTETEANCQSLCLSMCPCNAYSYNATYSDRSYFSCWIWTRPLPTLQEEQDDGRDFSVLVKSSDIESTAKSCGPCGTYIIPYPLSTGPKCGDPMYNKFNCDLLTGQLSFMMPDGKSYRVTMIDEGGRKFYIQTNDTNCGDSSSKIYQNDKPSSPFNVTNWCIKDDEIEVNWEPAPEPLCDEYNSCKNWPHSTCIAKNVGGENRCRCDSKYLWNPSSLRCTKESSRNHSSYRMPLTIAVICIVIIILTCTVVFAYIRRKKIGHKLDNVSIRIQESLNDSEKHVKNLIGLGSLEENDSESIEVPYYTFRSIQAATNNFSESNKLGRGGYGPVYKGRFPGGQDIAIKRLSSVSTQGLQEFKNEVVLIAKLQHRNLVRLRGYCVKGDEKILLYEYMSNKSLDTFIFDRSRAVLLGWNLRFDIIIGIARGMLYLHQDSRLRVIHRDLKTSNILLDDEMIPKISDFGLAKIFGGKETEASTQRVMGTYGYMAPEYALDGFFSIKSDVFSFGIVLLEILSGKKNTGFFRSQQISSLLGYAWRLWTENKLLDLMDSALSETCNENEFIKCAHIGLLCVQDEPGDRPTMFNILTMLDSETATIPLPTQPTFFMTKHQSSSSSSSKLEISMQFDSSYQEGR* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1240 998 ProSiteProfiles Protein kinase domain profile. 683 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1240 998 CDD STKc_IRAK 689 955 - -
Mal4g1240 998 Pfam S-locus glycoprotein domain 252 317 IPR000858 GO:0048544
Mal4g1240 998 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 996 - -
Mal4g1240 998 ProSiteProfiles PAN/Apple domain profile. 342 430 IPR003609 -
Mal4g1240 998 Pfam PAN-like domain 348 410 IPR003609 -
Mal4g1240 998 Gene3D Transferase(Phosphotransferase) domain 1 759 962 - -
Mal4g1240 998 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 996 - -
Mal4g1240 998 Pfam Protein tyrosine and serine/threonine kinase 686 953 IPR001245 GO:0004672|GO:0006468
Mal4g1240 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Mal4g1240 998 SMART serkin_6 683 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1240 998 CDD B_lectin 35 154 IPR001480 -
Mal4g1240 998 SUPERFAMILY Protein kinase-like (PK-like) 664 985 IPR011009 -
Mal4g1240 998 ProSiteProfiles Bulb-type lectin domain profile. 22 152 IPR001480 -
Mal4g1240 998 Pfam D-mannose binding lectin 79 169 IPR001480 -
Mal4g1240 998 Gene3D - 17 153 IPR036426 -
Mal4g1240 998 Gene3D Phosphorylase Kinase; domain 1 649 758 - -
Mal4g1240 998 SMART blect_4 32 154 IPR001480 -
Mal4g1240 998 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 179 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1240 Mal-Chr4 17852830 17857766 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1240 657 991 Receptor kinase-like Gene Family AT4G23150 52.353 1.32e-122 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g1240 PK_Tyr_Ser-Thr 8.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1240 - - gmx:100807185 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1240 4 17852830 17857766 Mal4g1240 4 17852830 17857766 ECH
Mal7g1588 7 52246857 52251425 Mal4g1240 4 17852830 17857766 PCT