Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1238 ATGGCAAATAAGAGCTTGGATACTCTATTATTTGGCCAAACACAAACACTATTTTTGGATTGGAAATTGCGCTATGCCATTATTTTAGGCATTTCTCGAGGATTGTTGTACCTGCATCACGATTCAAGGCTGAGGGTCATACATAGGGATATAAAAACAAGTAATATCCTCTTAGACCAGGATATGACTCCCAAGATATCAGATTTTGGTCTTGCGAAAATATTTGGGGGGAGGGAGACTGAAGCAACAACAAAGAAAATAGTGGGAACCGTTGGATATATGTCTCGGGAGTATGCTGCAGAAGGAGTTTTTTCAATAAAATCTGATGTTTTCAGTTACGGTGTAGTCCTACTAGAGATACTCAGCGGTAAAAAGAACACTAAACATATCCCGTACGAAGAAAATTGTACCAGTCTTTTGAGTTATGCATGGAGATTGTGGAAAAAGGATAAGTTGATGAATTTAATGGACCCAACACTTAAAGAAACTTGCAACGGTGATCAATTCATTAAATGTGCACATATTGCAATGTTGTGCGTACAAGATGATCCAAATGATCGTCCCACTATGTCAAACATTGTAACAATGTTAGATGGTGAGATTGCAACCATGCCAACTCCTAAAGAGTCCATCTTTTTTAGGACGCATCAATCTGGTGCAACTTCTTCTAGAGAGCCCGAAATAACTTTACATTCTGAGAGCAATTATCCAATAAAAAGGTTTGAGGATTATTTAGGAGCGCTACAAGGAAATAATTTTTCCTCTGGAACAAGTAGCTCTTAG 783 0.3806 MANKSLDTLLFGQTQTLFLDWKLRYAIILGISRGLLYLHHDSRLRVIHRDIKTSNILLDQDMTPKISDFGLAKIFGGRETEATTKKIVGTVGYMSREYAAEGVFSIKSDVFSYGVVLLEILSGKKNTKHIPYEENCTSLLSYAWRLWKKDKLMNLMDPTLKETCNGDQFIKCAHIAMLCVQDDPNDRPTMSNIVTMLDGEIATMPTPKESIFFRTHQSGATSSREPEITLHSESNYPIKRFEDYLGALQGNNFSSGTSSS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1238 260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Mal4g1238 260 SUPERFAMILY Protein kinase-like (PK-like) 1 225 IPR011009 -
Mal4g1238 260 SMART serkin_6 3 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1238 260 Gene3D Transferase(Phosphotransferase) domain 1 1 210 - -
Mal4g1238 260 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1238 260 Pfam Protein kinase domain 5 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1238 260 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 237 - -
Mal4g1238 260 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1238 Mal-Chr4 17639122 17640283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1238 1 234 Receptor kinase-like Gene Family AT4G11480 48.571 9.31e-78 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g1238 Pkinase 8.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1238 - - ahf:112705270 311.227