Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1234 ATGTTCAATACAAGGAAGCCATGGTTCTGGCTTTCTCTTCTCAACCTCTTGTTCTCTTTACACTTCTATCATTCCCTTGCAGCTCTAACAATAACAACCATCTCTGCAAACCAAACTCTCTCTGGTGACCAAACTCTAGTCTCTGAAGGGAAAAACTTTGAATTGGGTTTTTTTAAACCAGGTAATTCTTCTAACTACTACATAGGAATATGGTACAAAAAGGTCTATGTACAAACAATTGTTTGGGTAGCCAACAGAGACAACCCTGTCTCTGATAAAAACACTGCCACCTTAAAAATTTCAGCTGGTAATTTAGTTCTATTGGATGAGTCTTCAAACCAAGTTTGGTCAACAAACATGAGTTCTCCTAAGTCAGATTCTGTTGTAGCTATGCTTCTAGATACTGGAAATCTTGTTTTGAGAAAAAGGCCTAATGATGATGTATCAAATTCTCTATGGCAGAGTTTTGATCATCCAACAAATACATGGCTTCCTGGTGGCAAAATTAAGCTGGACAATAAAACAAAGAAGCCTCAGTATCTTACTTCATGGAAGAATAATGAAGATCCTTCAACGGGTCTATTCTCTTTGGAACTAGACCCAAATGGAACAAATTCATATCTTATTCTTTGGAATAAGTCTAAAGAGTATTGGACAAGTGGACCTTGGAATGGACAAATTTTTAATCTTGTTCCTGAGATGAGGTTAAATTACTTATACAATTTTTCATTTGTGTCGAACGAGAATGAGAGCTATTTCACTTACTCCGTGTATAGCAATTCCACTATATCTCGGTTTGTGATAGATATCTCGGGGCAGATCAAGCAATACACGTGGTTGGAAAGTACCCAACAATGGAACCTCTTTTGGTCGCAGCCAAGAGGACAATGTGATGTTTATGCTTTCTGCGGCGCATTTGGGAGCTGTTTTGAAAACTCCATGCCTTATTGTAGTTGTTTGAGAGGTTTTGAGCCAAAGTCAGTGTCTGAATGGAATCTGGGGGATAACTCAGGTGGGTGTGTAAGGAAAACAAGTTTGCAATGTGAGGGTTCAAGTCTCTCTAATGGTGATAAGGACATGTTTTTTGCGATCCCGAACATGGCATTACATATACAGGCACATCAATCTGTGGGGTTAGGGAATGCAGCTGAATGTGAATTAAGTTGCTTGAAAAACTGCTCCTGCACTGCCTATGCATATGATAGTAATGTATGTTCAATATGGATCGGAGAACTCATGAATGTGCAACAATTGTCTTCTGATGATAGTAGTGGACAAACTTTGTATGTCAAAGTTGCAGCATCAGAGTTCCGTGATGCTAGTATAAACAGTACTCATGCGAAGATGATTATTGGTGGTGTTGTGGGCGCGGTTGTTGGTATAGGGGTACTCTTAGCCCTTCTGTTGTTTTTCATGCTTAGGCGAAGAAAGAGAATGCTTGCAACGGGAAAGCTATTGGAGGGTTTTATGGTGGAATTTGGGTACAAGGATTTGCAAAACGCGACTAGGAATTTCTCCGAGAAATTGGGAGGAGGAGGTTTTGGTTCTGTTTTCAAAGGAACATTAGCCGATTCAAGTATGGTGGCAGTGAAGAAACTGGAGGGGACTAGCCAAGGAGAGAAGCAGTTCAGAACAAAAGTGAGTATAATAGGGACAATACAACATGTTAATCTTGTTCGCCTCCGTGGATTCTGCTCAGAAGGTACCAAAAGGTTGCTGGTTTATGATTACATGCCAAATTGTTCTTTGGATTTCCATTTGTTCGGGAACAATAAATCTGAGGTGTTGGACTGGAAAATGAGATACCAAATTGCTGTTGGAGTTGCAAGGGGACTAATTTACCTCCACGAGAAATGCGAAGACTGTATCATACACTATGATATAAAGCCAGAAAACATTCTCCTTGATGCTGATTTTTGTCCAAAAGTTGCAGACTTTGGTCTAGCTAAGCTAATTGGACGGGATTTCAGAAGAATCCTTACAAACATGAAAGGATCAAGAGGTTATCTTTCCCCAGAATGGTTATCTAAGGATGCTACCACAGCCAAAGCTGATGTTTATAGTTACGGAATGATGCTTTTTGAGGTTGTATCAGGTAGGAGGAACTCTGATCCATCTGCAGATGACCAAAGTACTTTCTTTCCAACCTTGGCTGCTAAAGTAGTTAACCAAGGTGGTAATGTCCTTACCCTTTTGGACCCTAGGTTGGAGGGAAATGCTGACATTGAGGAAGTGACTGAAATGATAAAAGTTGCTTCTTGGTGTGTCCAAGAAAATGAAACTCAGAGGCCAACCATTCGCCAGGTAGTTCATATTCTCGAAGGGATCTTGGATGTGAATTTGCCACCAGTTCCAAGATTCAATCAAGTGCTTGTAGATAACTAA 2385 0.4021 MFNTRKPWFWLSLLNLLFSLHFYHSLAALTITTISANQTLSGDQTLVSEGKNFELGFFKPGNSSNYYIGIWYKKVYVQTIVWVANRDNPVSDKNTATLKISAGNLVLLDESSNQVWSTNMSSPKSDSVVAMLLDTGNLVLRKRPNDDVSNSLWQSFDHPTNTWLPGGKIKLDNKTKKPQYLTSWKNNEDPSTGLFSLELDPNGTNSYLILWNKSKEYWTSGPWNGQIFNLVPEMRLNYLYNFSFVSNENESYFTYSVYSNSTISRFVIDISGQIKQYTWLESTQQWNLFWSQPRGQCDVYAFCGAFGSCFENSMPYCSCLRGFEPKSVSEWNLGDNSGGCVRKTSLQCEGSSLSNGDKDMFFAIPNMALHIQAHQSVGLGNAAECELSCLKNCSCTAYAYDSNVCSIWIGELMNVQQLSSDDSSGQTLYVKVAASEFRDASINSTHAKMIIGGVVGAVVGIGVLLALLLFFMLRRRKRMLATGKLLEGFMVEFGYKDLQNATRNFSEKLGGGGFGSVFKGTLADSSMVAVKKLEGTSQGEKQFRTKVSIIGTIQHVNLVRLRGFCSEGTKRLLVYDYMPNCSLDFHLFGNNKSEVLDWKMRYQIAVGVARGLIYLHEKCEDCIIHYDIKPENILLDADFCPKVADFGLAKLIGRDFRRILTNMKGSRGYLSPEWLSKDATTAKADVYSYGMMLFEVVSGRRNSDPSADDQSTFFPTLAAKVVNQGGNVLTLLDPRLEGNADIEEVTEMIKVASWCVQENETQRPTIRQVVHILEGILDVNLPPVPRFNQVLVDN* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1234 794 ProSiteProfiles PAN/Apple domain profile. 348 433 IPR003609 -
Mal4g1234 794 PIRSF SRK 4 794 IPR024171 GO:0004674
Mal4g1234 794 Gene3D - 27 157 IPR036426 -
Mal4g1234 794 ProSiteProfiles Protein kinase domain profile. 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1234 794 ProSiteProfiles Bulb-type lectin domain profile. 31 153 IPR001480 -
Mal4g1234 794 Pfam Protein kinase domain 506 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1234 794 CDD B_lectin 37 159 IPR001480 -
Mal4g1234 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 224 IPR036426 -
Mal4g1234 794 SMART ntp_6 356 432 IPR003609 -
Mal4g1234 794 Gene3D Transferase(Phosphotransferase) domain 1 578 781 - -
Mal4g1234 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Mal4g1234 794 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 7 794 - -
Mal4g1234 794 Pfam D-mannose binding lectin 79 185 IPR001480 -
Mal4g1234 794 SMART serkin_6 503 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1234 794 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 794 - -
Mal4g1234 794 ProSitePatterns Protein kinases ATP-binding region signature. 509 532 IPR017441 GO:0005524
Mal4g1234 794 Pfam PAN-like domain 356 415 IPR003609 -
Mal4g1234 794 CDD STKc_IRAK 509 776 - -
Mal4g1234 794 CDD PAN_AP_plant 344 433 - -
Mal4g1234 794 SUPERFAMILY Protein kinase-like (PK-like) 491 786 IPR011009 -
Mal4g1234 794 SMART blect_4 37 159 IPR001480 -
Mal4g1234 794 Pfam S-locus glycoprotein domain 218 327 IPR000858 GO:0048544
Mal4g1234 794 Gene3D Phosphorylase Kinase; domain 1 470 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1234 Mal-Chr4 17426278 17428662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1234 457 783 Receptor kinase-like Gene Family AT5G20050 40.822 1.08e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal4g1234 Pkinase 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1234 - - gmx:100809852 1127.08