Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1232 ATGATGAGAACTCCATTTTGTGACAAAAATGGATTAAGGAAAGGCACATGGACACCTGAGGAAGACAAAAAGTTGATTGCTTATGTAACTAGGTATGGGAGCTGGAATTGGCGACAACTACCTAAATTTGCAGGTCTTCAAAGGTGTGGGAAGAGTTGTAGACTAAGGTGGTTGAACTATCTAAGGCCAGATATCAAAAGAGGGAGCTTTAGTCAGCAAGAAGAAGAGACTATCATCAAACTTCACGAAAAATTGGGTAATAGATGGACCGTGATTTCTGCAAATTTACCGGGAAGAACAGATAACGAGATAAAAAATCATTGGCACACGACCTTAAAGAAGAGGTTGATAAAAAATAAGTCAAACACTAAACGTGGAACGAGAAAAGCCAAAGATTCAAATTCAAAAAATCACCCTTCAATAGAAGAAGCCAAGAAACTTGAAGGAGTGTTAGAGAACAATAGTGATCCCAATATTGCAAGTCCACCATCTTCACATACATCTTCAAGTAAATTATCTTGCATAACAATGGATACTGCAGCTACCACAATATCATATGAAAATTCGCTTTTTGATGATTATGACCTTCCTTTTATCGATGCATACATGGAGTCTGTGAATGAAAATTTCTGGACAGAGCCATATATGATAGACAATTCATATGTACCTCCAAGTGAAGATGATATATTGCTACCTGCAGGGTGTGAACTTGAATACTTTAGTCATGTCTACGATGTAGAACTTTGGAGCTATGGAGAATAA 762 0.3727 MMRTPFCDKNGLRKGTWTPEEDKKLIAYVTRYGSWNWRQLPKFAGLQRCGKSCRLRWLNYLRPDIKRGSFSQQEEETIIKLHEKLGNRWTVISANLPGRTDNEIKNHWHTTLKKRLIKNKSNTKRGTRKAKDSNSKNHPSIEEAKKLEGVLENNSDPNIASPPSSHTSSSKLSCITMDTAATTISYENSLFDDYDLPFIDAYMESVNENFWTEPYMIDNSYVPPSEDDILLPAGCELEYFSHVYDVELWSYGE* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1232 253 MobiDBLite consensus disorder prediction 154 171 - -
Mal4g1232 253 CDD SANT 69 112 IPR001005 -
Mal4g1232 253 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal4g1232 253 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mal4g1232 253 CDD SANT 16 61 IPR001005 -
Mal4g1232 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal4g1232 253 MobiDBLite consensus disorder prediction 152 171 - -
Mal4g1232 253 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal4g1232 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 220 - -
Mal4g1232 253 Gene3D - 68 147 - -
Mal4g1232 253 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal4g1232 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal4g1232 253 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 220 - -
Mal4g1232 253 MobiDBLite consensus disorder prediction 126 142 - -
Mal4g1232 253 SMART sant 66 114 IPR001005 -
Mal4g1232 253 SMART sant 13 63 IPR001005 -
Mal4g1232 253 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal4g1232 253 MobiDBLite consensus disorder prediction 115 142 - -
Mal4g1232 253 Gene3D - 7 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1232 Mal-Chr4 17358301 17360898 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1232 1 220 MYB Transcription Factor Family AT2G31180 47.748 1.02e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal4g1232 Myb_DNA-binding 8.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1232 K09422 - mtr:MTR_2g089420 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1232 4 17358301 17360898 Mal4g1232 4 17358301 17360898 ECH