Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1231 ATGGAGTTTGACCTTGAAAACCCTCTTGAATATTTCCATGACCTTCCTAATTGTCAAGATGTTTCTTCTCTTTTCCTCATTGAATCTGACCACATCCCACCAACTAATTACTTTCAAAATCTCAAATCAAACGACTTTGATATCTCTATTAGAAGTGATTTCATATCTTTGATCTCACAGTTGTCTTGCAACTTCGATCCATTTGTGACTTACCTAGCTATCAACTATTTGGATCGCTTCCTAGCTAACCAAGGAATATTGCAACCAAAGCCATGGGCAAACAAACTTCTTGCAGTAACTTGTTTTACTCTAGCAGTAAAGATGTTGAAAACAGAGTACTCTGCCACTGATGTTCAGGCTCTTCTTAATCATGGTGATGGTGGTTTCATTTTTGAGACACAAACAATAAAAAGAATGGAAGCACTTGTCTTAGGAGCACTACATTGGAGAATGCGTTCTATCACTCCTTTCTCTTTCATTCCTTACTTCACCAATTTGTTTAGGCTTGATGATATAACATTAAGGGTTCTGAAAGATAGAGCTTCTGAAATTATATTAAAGTCACAAAAAGATATAAAGGTTTTGGAATTCAAGCCATCTATAGTTGCTGCTTCATCCCTTCTTTATGCTTCACATGAGTTGTTTCCCTTTCAATATCCATGCTTCTTGGGAACAATATCCAATTGTTCGTATGTAAATAAAGAAAGTGTTATGCAGTGCTATAATGTAATACAAGATATATCTAAGGAGGAGTACGAATCCATGTTTAATGTGAATTCAAGTTCAGGCACACCGGTTAATGTGTTGGACGAAAATTTTCTAAGCTTGGAAAGTGAAAAAACCAACGGAAGCAATGTTGCTCATACTACTATGATACAAGAGAAGCACTTCAAGAGAAGGAAAATTTAA 909 0.3575 MEFDLENPLEYFHDLPNCQDVSSLFLIESDHIPPTNYFQNLKSNDFDISIRSDFISLISQLSCNFDPFVTYLAINYLDRFLANQGILQPKPWANKLLAVTCFTLAVKMLKTEYSATDVQALLNHGDGGFIFETQTIKRMEALVLGALHWRMRSITPFSFIPYFTNLFRLDDITLRVLKDRASEIILKSQKDIKVLEFKPSIVAASSLLYASHELFPFQYPCFLGTISNCSYVNKESVMQCYNVIQDISKEEYESMFNVNSSSGTPVNVLDENFLSLESEKTNGSNVAHTTMIQEKHFKRRKI* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1231 302 SMART cyclin_7 158 246 IPR013763 -
Mal4g1231 302 SMART cyclin_7 53 145 IPR013763 -
Mal4g1231 302 PANTHER CYCLINS 5 300 IPR039361 -
Mal4g1231 302 SUPERFAMILY Cyclin-like 21 151 IPR036915 -
Mal4g1231 302 CDD CYCLIN 53 144 IPR013763 -
Mal4g1231 302 SUPERFAMILY Cyclin-like 136 247 IPR036915 -
Mal4g1231 302 SMART Cyclin_C_2 154 268 IPR004367 -
Mal4g1231 302 CDD CYCLIN 154 244 IPR013763 -
Mal4g1231 302 Pfam Cyclin, C-terminal domain 154 250 IPR004367 -
Mal4g1231 302 Gene3D - 34 152 - -
Mal4g1231 302 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 300 - -
Mal4g1231 302 Pfam Cyclin, N-terminal domain 28 151 IPR006671 -
Mal4g1231 302 Gene3D - 23 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1231 Mal-Chr4 17311108 17313328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1231 1 301 Core Cell Cycle Gene Families AT4G03270 44.127 7.45e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1231 K18812 - gmx:100799951 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1231 4 17311108 17313328 Mal4g1231 4 17311108 17313328 ECH