Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1224 ATGGCACAGGCTACAAAACCAAACCACAAACTTATTGAGCAAACTATGATTATTCCATCACCTTCATCATCAACAAAAACAATTTCTCTTCCTCTTACATTTCTTGACTTGCCTTTAGCAGGTCCAATTTACGTTAGACGCCAATTCTTCTATCACTTTCCTCATTCAACCAACCATTTTTGTAAAACAACACTTCCATCTCTCAAAAACTCTCTTTCCCTCACTCTTCAACATTTCTTCCCTCTTGCCGGAAATCTCATCTCTCCACCACCTCCTCACAAACCCTACATCCTCTGCACTAAAAAAGATTATGTCACCTTTACCATCGTTGAATCCTCGGCAAATTTTAACAATCTTTCAGCCAATCATCACCCCAAAAGTCTCAAAGACTATAACCACCTTGTTCCAAAACTAACACACAAAACAAACCATGATGATAATGGCAATGGAAATAACAACTTTGTCTTTCCTTTGTTGTCTTTGCAAGCTTCTATTTTTCCTAACAATGGTCTTTGCATTGCAATCACATATTGTCATGTTATAGATGATAGTTGTTGTAGTCATTTCATGAAATCTTGGACTTTTATCCATCAAAATTGTGAAGTTGTTGACTTGAAGTCAACACCTTGTTTTGATAGAAATGTTTTGAGGGACCCAAAAGGGCTTGAGAATGTTTTCTTAAGAGACTATTTTGAAGAAAGAAAAACATGGAAGGATAAACTTATTGGTCACACTCAAAGTCATACTAGTGAAAAAGAACAACATGAAGACTATGTTAAAGCAACTATTGTTTTTGGAAAAGAAGAAATTGAAAGAATGAAAAAATGGGCACTTGATCAATGGAAGAAAAATGATCATGAAATCAAAGTGCCACAATCTTTATCTAAATTTGTTGTAACTTGTGGTTTCATTTGGTCTAGTTTGGTTAAAACAAGATATAGAAATGAAAACGATAATGGTGATGAAAAAGAAGAGTATTTTCGTTTTGCAGGTGATTGTAGAGATAGACTTGGGTACAAAATACCAGAGGGGTATTTTGGGAATTGTTTAACATTATGTCATGCAACTGTGAAGAGAAAGGATATGAAGGGGGAAGATGGTTTTGTGAATGCTGTTAAGGTAATTGAAAGGGCAATTAGTGAAATGAAAAATGAACCTTTTAATGATGTAGGAGAATGGAGGGAAACATTTAAGAAGATGTATGAGTTGGGAAGTGTATTGTTGGTAACAGGATCACCTAAGTTTAATGTTTATGAGACTGATTTTGGATTTGGAAGACCTGTTAAAGTTGAGATGGTGCATTCGTGTAAGTGTATGTCTCTGGCTGAAAGTGGAGATAGAGAAGGTGGAATTGAGGTTGGATTGGTATTTAAAAGTGGAGAACTTGAATATTTTTGTTCTGTTATTGAACAAGGATTTGAAGCTTTGAAATCCTAA 1437 0.35 MAQATKPNHKLIEQTMIIPSPSSSTKTISLPLTFLDLPLAGPIYVRRQFFYHFPHSTNHFCKTTLPSLKNSLSLTLQHFFPLAGNLISPPPPHKPYILCTKKDYVTFTIVESSANFNNLSANHHPKSLKDYNHLVPKLTHKTNHDDNGNGNNNFVFPLLSLQASIFPNNGLCIAITYCHVIDDSCCSHFMKSWTFIHQNCEVVDLKSTPCFDRNVLRDPKGLENVFLRDYFEERKTWKDKLIGHTQSHTSEKEQHEDYVKATIVFGKEEIERMKKWALDQWKKNDHEIKVPQSLSKFVVTCGFIWSSLVKTRYRNENDNGDEKEEYFRFAGDCRDRLGYKIPEGYFGNCLTLCHATVKRKDMKGEDGFVNAVKVIERAISEMKNEPFNDVGEWRETFKKMYELGSVLLVTGSPKFNVYETDFGFGRPVKVEMVHSCKCMSLAESGDREGGIEVGLVFKSGELEYFCSVIEQGFEALKS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1224 478 Pfam Transferase family 12 467 - -
Mal4g1224 478 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 478 - -
Mal4g1224 478 Gene3D - 9 242 IPR023213 -
Mal4g1224 478 Gene3D - 255 476 IPR023213 -
Mal4g1224 478 PANTHER - 7 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1224 Mal-Chr4 17203539 17204975 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1224 49 428 Monolignol Biosynthesis Gene Families AT5G48930 20.611 5.75e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1224 - - aprc:113855905 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1224 4 17203539 17204975 Mal4g1224 4 17203539 17204975 ECH