Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1170 ATGGGGTGTTGTGTCTCAACAAGCAATAGAAGTAATGACGGCTCGGACACTCCATCTTGTCTTGAAATCGGTTTGTGTGGTCAAAAGAAAGCAAGAAGAACATTCTCTGATCATGTTGTTTCTCTGAACAAGTTAACATCTTTACCAAATAGAATATTCAGTAACGGAAAGAGTCGGTCTTCTTGTATATTTACGCAGCAGGGTCGTAAGGGTGTTAATCAGGATGCTATGATTGTATGGGAAGATTTCATGTCAGAAGATGTGATCTTCTGCGGTGTGTTTGATGGCCATGGTCCACACGGTCACCTAGTTGCGCGCAAAGTTAGGGATGCCTTGCCGATCAAATTGCTTTCATTTTTGGATTCCTCTGAGTCGAGGAGAAATGAATCCAGTAAAGCTTGTTTCAAGGAGAAAAAACTTGAAAGTGGAGAGACTGAGAATAATTTCTCTGCTGAGAATGAGGTGAATTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCCATGGACAAAGAGCTGAAGTCGCATGCAAATTTGGACTGTTTTTGTAGTGGAAGCACATCTGTGACAGTAGTAAAACAGGGTTCAAATTTGTTCATGGGCAATATTGGTGATTCAAGAGCAATCATGGGATCCAAGGATAGCAATGACTTGATGGTGGCAATTCAGCTGACAGTTGATCTAAAACCTGATTTACCTAGAGAAGCTGAAAGAATTAAAAAGTGCAAGGGTAGGGTATTTGCATTGGAAGATGAACCAGAAGTTCCTAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGTTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTACGCACCGGCTTCTCACAGACAGAGATCAGTTCATTGTTCTTGCCTCGGACGGTATATGGGATGTTTTGAGCAATGAAGAGGTGGTGGAGATAGTATCATCAGCGCCAAATCGATCATCGGCAGCGAGGGTTCTGGTGGAATCTGCCGCACGAGAGTGGAAACTTAAGTATCCAACTTCGAAAATGGATGACTGTGCTGTTGTGTGTCTATTTTTGGATGGGAAAATGGACTTAGAAGAATCTGATTGTGATGAACAATGCTATTCTTCCGCAACCAACCAGAGCAACAAGCATTCAGGTAATCCAGTTGAGTCGGATGATGGTCAAAAGTCCGAGCCATCTTTGCGAAGGAACTTCACTGTGAGAACCTCAAAAGATAATGAGGCATGTGTAGGAGAAGGAGGAAAAGGAGGAGAATCTGTTGATGTTGAAGATGGAACATCATCAGCTGAAGATCAAAACTGGTTAGGTCTAGAAGGTGTCACCCGAGTAAACTCACTGGTACAACTTCCTAGATTTTCTGAAGAAAAGCCTAACTCTTGA 1416 0.4237 MGCCVSTSNRSNDGSDTPSCLEIGLCGQKKARRTFSDHVVSLNKLTSLPNRIFSNGKSRSSCIFTQQGRKGVNQDAMIVWEDFMSEDVIFCGVFDGHGPHGHLVARKVRDALPIKLLSFLDSSESRRNESSKACFKEKKLESGETENNFSAENEVNSMWREAFMKAYKAMDKELKSHANLDCFCSGSTSVTVVKQGSNLFMGNIGDSRAIMGSKDSNDLMVAIQLTVDLKPDLPREAERIKKCKGRVFALEDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFTHRLLTDRDQFIVLASDGIWDVLSNEEVVEIVSSAPNRSSAARVLVESAAREWKLKYPTSKMDDCAVVCLFLDGKMDLEESDCDEQCYSSATNQSNKHSGNPVESDDGQKSEPSLRRNFTVRTSKDNEACVGEGGKGGESVDVEDGTSSAEDQNWLGLEGVTRVNSLVQLPRFSEEKPNS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1170 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Mal4g1170 471 CDD PP2Cc 59 363 IPR001932 -
Mal4g1170 471 ProSiteProfiles PPM-type phosphatase domain profile. 60 363 IPR001932 -
Mal4g1170 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Mal4g1170 471 SUPERFAMILY PP2C-like 49 365 IPR036457 -
Mal4g1170 471 Gene3D - 50 365 IPR036457 -
Mal4g1170 471 Pfam Protein phosphatase 2C 87 341 IPR001932 -
Mal4g1170 471 SMART PP2C_4 49 361 IPR001932 -
Mal4g1170 471 MobiDBLite consensus disorder prediction 394 414 - -
Mal4g1170 471 MobiDBLite consensus disorder prediction 380 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1170 Mal-Chr4 16603938 16606083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1170 1 471 PP2C-type Phosphatase Gene Family AT1G03590 66.879 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1170 - - gmx:100777448 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1170 4 16603938 16606083 Mal4g1170 4 16603938 16606083 ECH
Mal4g1170 4 16603938 16606083 Mal7g1501 7 48658748 48662378 PCT