Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1158 ATGGCTGCAGCTAAGAACAGTGGCAAATTCAACCAAGATTTTGGTGATGGAACTCATAACAATCACAACAAGGTTACAAATATTGGTGAAAGCCAAGTTAATTGGGAGATTGAAAAAGGAAAAAGTGTTGAAATAAGCTCTTCTCAAAGACATCATTGGAAGCCAGTTTTTGATGAAGCTTCAAGTATGTCACATAATAGACCTCACAAGAAAAGCAAAAGTCCTCAACGTGAAAATCAAAACCAAAATCAGTTTCAACCTTTCTCTGTTCCTAATTCAGCTTCTTCTTCTTCAAGACTTGTTTTTCCTTTTGCTTTTGATCATAATTCACAACAATTTGGTGCCAACAACAATTTACCTTTTCACCCTCAACAACCTATTCAAACAACACAAAACCAACCACAACAAATGATATCTTTTGGTTCACAATCACAACAACAGAACAATCTTGTTCCATATCCACCAATGTTGTCTCAACAACAACATCAACAACAGATTCTTCAATATTGGAGTGATGCATTGAATCTTAGTCCAAGGGGAAGAATGTTGATGATGATGAACAATAACAACAATAGGTATTTGGGAGGGCAATATGGTAATAATAATGGACCAATGTTTAGGCCTCAAGTTCAACCTATAAGCACTACAAAACTCTATAGAGGAGTGAGACAAAGACATTGGGGAAAATGGGTTGCTGAAATTCGTCTACCTCGAAATAGAACTCGTCTTTGGTTAGGAACATTTGATACTGCAGAAGATGCTGCTTTAGCCTATGATCGCGAAGCGTTTAAGTTAAGAGGTGAAAATGCAAGGCTCAATTTTCCTGACTTGTTTCTCAACAAAGAAAAAGATAAAGAAAAAGAAGAAGCACCTTCATCACCACCTCCAACTACAACAACGACAAATTCAACGGTTACTTCACCTTCAAGTAACACTGCGACAAAGCAACCTGAGCCTCCTCCGATGCAGACACTTCCAATGGAAGAGTCTAATGAGAATGACTCTGGAATTGGATCAAGTGACGCGACAGTGAGTGAAGGCGGAGAAGGAGTATCAGTTTCGCAGTCTCAAGAATTGGTTTGGAGTGAAATGTCAGCATGGTTTAATGCTATTCCAGCTGCTTGGGGACCAGGTAGTCCTGTTTGGGATGATTTGGATACAAACAATAACCTTTTTTCGCAGTCGCAAATTCCATTTTCCAATCTCAATCAACAATCAGAATACAATGATTTTGATTCTCAGATGGAGTCAGGTTCTTCTTCCATTAGGCCTTTCTTATGGAATAATGATCAAAATTAA 1299 0.3818 MAAAKNSGKFNQDFGDGTHNNHNKVTNIGESQVNWEIEKGKSVEISSSQRHHWKPVFDEASSMSHNRPHKKSKSPQRENQNQNQFQPFSVPNSASSSSRLVFPFAFDHNSQQFGANNNLPFHPQQPIQTTQNQPQQMISFGSQSQQQNNLVPYPPMLSQQQHQQQILQYWSDALNLSPRGRMLMMMNNNNNRYLGGQYGNNNGPMFRPQVQPISTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPDLFLNKEKDKEKEEAPSSPPPTTTTTNSTVTSPSSNTATKQPEPPPMQTLPMEESNENDSGIGSSDATVSEGGEGVSVSQSQELVWSEMSAWFNAIPAAWGPGSPVWDDLDTNNNLFSQSQIPFSNLNQQSEYNDFDSQMESGSSSIRPFLWNNDQN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1158 432 MobiDBLite consensus disorder prediction 43 66 - -
Mal4g1158 432 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 425 - -
Mal4g1158 432 MobiDBLite consensus disorder prediction 283 356 - -
Mal4g1158 432 MobiDBLite consensus disorder prediction 77 92 - -
Mal4g1158 432 MobiDBLite consensus disorder prediction 1 92 - -
Mal4g1158 432 Gene3D AP2/ERF domain 218 276 IPR036955 GO:0003700|GO:0006355
Mal4g1158 432 PRINTS Ethylene responsive element binding protein signature 219 230 IPR001471 GO:0003700|GO:0006355
Mal4g1158 432 PRINTS Ethylene responsive element binding protein signature 241 257 IPR001471 GO:0003700|GO:0006355
Mal4g1158 432 SUPERFAMILY DNA-binding domain 218 276 IPR016177 GO:0003677
Mal4g1158 432 SMART rav1_2 218 281 IPR001471 GO:0003700|GO:0006355
Mal4g1158 432 MobiDBLite consensus disorder prediction 326 356 - -
Mal4g1158 432 ProSiteProfiles AP2/ERF domain profile. 218 275 IPR001471 GO:0003700|GO:0006355
Mal4g1158 432 Pfam AP2 domain 219 267 IPR001471 GO:0003700|GO:0006355
Mal4g1158 432 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 1 425 - -
Mal4g1158 432 MobiDBLite consensus disorder prediction 411 432 - -
Mal4g1158 432 CDD AP2 217 277 IPR001471 GO:0003700|GO:0006355
Mal4g1158 432 MobiDBLite consensus disorder prediction 292 318 - -
Mal4g1158 432 MobiDBLite consensus disorder prediction 11 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1158 Mal-Chr4 16369093 16370391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1158 1 422 AP2-EREBP Transcription Factor Family AT2G20880 39.080 1.88e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal4g1158 AP2 3.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1158 - - gmx:100809887 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1158 4 16369093 16370391 Mal4g1158 4 16369093 16370391 ECH