Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1155 ATGCCTCAACTTAAGCTACTTTTCATTCTTATTCTTCTTCACACTCTAACCATTGTGAGTTATGTTGCCACTACTGAATTTGTCTATAATACAAACTTCAACTCCACAAACATAATCCTATATGGAAATGCAACCATTAACAAATCCATTCTCACTCTCACTAATGACACTTCCACTTCCTTCCCAATAGGTCATGCTTTTTACCCTCACAAAATACCTACAAAACCACCAAACTCTTCCATTCTTCTCCCCTTTGCTACTTCCTTCATTTTCTCTGTTTCTCCCATCAAAAAATTTATCCCTGGACATGGATTTGCCTTCATATTCACACCTTCAAGAGGTCTAAATGGAACAACATCAACTGAGTATATCGGTTTTTTAAATCGCACCAATCAAGGTAATCCTAACAACCATATTTTCGGAGTTGAATTTGATATAGTTAAAAACGAAGAATTCAACGATACAAATGATAATCATGTTGGTATTGACGTAAACTCGCTTACATCCTTAATTTCACATGAGGCTGGCTATTGGGGTGGGAAACATGACAAGAAGTTTAATGTGTTGAACATAAAAAGTGGAGAAAATTATCAAGTATGGATTGAATTTATGCACTCTCAGATAAACGTTACGATGGTTCGGGCAGGACAAAAGAGGCCACATGTGCCTCTTATCAGCATGAATCTTAACCTTTCTGGAGTTCTTATGGATGAAACTTATGTTGGATTCTGCGCAGCCACGGGGATGAAAAAAGACAGTGTTAAGATTCTTGCTTGGAGCTTTAGTAATACAAATTTTTCAATTGGTGATGCTTTAGTGACACACAACTTGCCTTCATTTGTCCCTCATAAAGGATGGTTTTCTGGAGCAAAGGCTATAGCTATAGGAATAACCAGTGTTGTCTGTGTCTTACTCATTGGTTGTGCAGTGTTATTTATTCTCTATATGAGAAACAAAGGAGAAGAAGAAATTGAAGATTGGGAACTAGAGTATTGGCCACATAGGATTAGTTTCCAAGAGATTTATGCAGCAACAGGAGGATTCTCTGAAGAGAATATGGTTGATTTGAGAGGGAACAAAAGTGTATATAAAGGGATTTTGTCAGGCGTTGAAGTTGCGGTGAAGAGAATCCCTCAAGAAAGAGAAGGGATGAGAGAGTTTTTGGCTGAGGTTTCAAGCTTAGGAAGATTGAAACACAGAAACTTAGTAGGATTCAGAGGTTGGTGCAAAGAAGAAAAGGCAAACTTGATTCTAGTTTATGACTTCATGAATAATGGAAGTTTAGATAAATGGATATTTGAGTGCGAAGAAGGAAAAATGCTTACATGGGAAGAGAGGATTCAAGTTTTGAAAAATGTAGCCACGGGGATTCTATACCTGCATGAAGGTTGGGAAGTTAAGGTCTTGCATAGGGATATCAAAGCAAGCAATGTTCTACTTGACAAGGACATGAATGCTAGATTGGGGGATTTTGGTTTGGCTCTCATGCATGAACATCACGGACAAGTAGCCAGCACAACAAAAGTACTCGGAACATTAGGATACATTGCTCCGGAAGTGATTCGAACAGGGAAAGCATCAACTATGTCCGATGTGTTTGGGTTTGGAATATTGGTGTTGGAAGTGATTTGCGGGCGAAGACCTATTGAAGAACATAAGCCAGGGTTAATTGAATGGGTTGAGTCTCTAATGGTGCTTGATCAATTGCACAATGCTGTTGATGAAAGGTTGAAGGCTAAAGGAGGATACTCCATTGAGGAAGTTGAGAGGTTGCTTCATTTGGGATTGTTGTGTTCAAATTCAGACCCTAGTGTTAGACCAATAATGAGGCAGGTTGTGAAAATGTTGGAGGGAGAAATGGATAGCATAGAATCTGATGAAGAAAACATGGAGACAAGTTTACTTGGAAGAATAAAATCAGCAGCAATGTGGTCTAGAACTGAAAGTGCACTTCCATATAGAGACCACCCTACTTTTGAAGAAATTAGAATGTTCAGTCATAATTCTAAGACGTCTACAAGTGGCTCAAGTTCCATTCCACCGTCAGATTCAGATATCATTAGGGAAGGCCGGTAA 2076 0.3878 MPQLKLLFILILLHTLTIVSYVATTEFVYNTNFNSTNIILYGNATINKSILTLTNDTSTSFPIGHAFYPHKIPTKPPNSSILLPFATSFIFSVSPIKKFIPGHGFAFIFTPSRGLNGTTSTEYIGFLNRTNQGNPNNHIFGVEFDIVKNEEFNDTNDNHVGIDVNSLTSLISHEAGYWGGKHDKKFNVLNIKSGENYQVWIEFMHSQINVTMVRAGQKRPHVPLISMNLNLSGVLMDETYVGFCAATGMKKDSVKILAWSFSNTNFSIGDALVTHNLPSFVPHKGWFSGAKAIAIGITSVVCVLLIGCAVLFILYMRNKGEEEIEDWELEYWPHRISFQEIYAATGGFSEENMVDLRGNKSVYKGILSGVEVAVKRIPQEREGMREFLAEVSSLGRLKHRNLVGFRGWCKEEKANLILVYDFMNNGSLDKWIFECEEGKMLTWEERIQVLKNVATGILYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLALMHEHHGQVASTTKVLGTLGYIAPEVIRTGKASTMSDVFGFGILVLEVICGRRPIEEHKPGLIEWVESLMVLDQLHNAVDERLKAKGGYSIEEVERLLHLGLLCSNSDPSVRPIMRQVVKMLEGEMDSIESDEENMETSLLGRIKSAAMWSRTESALPYRDHPTFEEIRMFSHNSKTSTSGSSSIPPSDSDIIREGR* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1155 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 266 IPR013320 -
Mal4g1155 691 PANTHER - 1 679 - -
Mal4g1155 691 Pfam Protein kinase domain 361 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1155 691 MobiDBLite consensus disorder prediction 666 683 - -
Mal4g1155 691 PANTHER LECTIN RECEPTOR KINASE 1 679 - -
Mal4g1155 691 CDD lectin_legume_LecRK_Arcelin_ConA 25 264 IPR001220 GO:0030246
Mal4g1155 691 Gene3D - 23 273 - -
Mal4g1155 691 SMART serkin_6 353 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1155 691 SUPERFAMILY Protein kinase-like (PK-like) 324 617 IPR011009 -
Mal4g1155 691 Pfam Legume lectin domain 25 265 IPR001220 GO:0030246
Mal4g1155 691 CDD STKc_IRAK 358 618 - -
Mal4g1155 691 Gene3D Phosphorylase Kinase; domain 1 313 422 - -
Mal4g1155 691 ProSiteProfiles Protein kinase domain profile. 348 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1155 691 MobiDBLite consensus disorder prediction 666 691 - -
Mal4g1155 691 Gene3D Transferase(Phosphotransferase) domain 1 423 640 - -
Mal4g1155 691 Coils Coil 613 633 - -
Mal4g1155 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1155 Mal-Chr4 16332759 16334834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1155 22 564 Receptor kinase-like Gene Family AT4G04960 55.357 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal4g1155 Pkinase 9.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1155 - - mtr:MTR_2g090410 1077.77