Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1153 ATGCCTCATCTTAAGCTACTTTTCATTCTTCTTCACACTCTAACCATTGTGAGTTATGTTTCCCCTACTGAATTTGTATATAATACAAACTTCAACTCCAAAAACATCATCCTATTTGGAAATGCCACCATTCAGAGCTCTATTCTCACTCTCACTAATGGTAGCCTCTTCTCCATAGGCCGTGCTTTTTACCCTAAGAAAATACCTATCAAACCTCCATACTCTTCCACCATTCTTCCCTTTGCAACCTCCTTCATTTTCTCTGTTGCCCCCATCAAAAACTCTATTGCAGGACATGGCTTGTCCTTCTTATTCACACCTTCAAGAGGTGTAAATGGCACAACATCAGCTGAGTTTATGGGCCTCTTCAATCTCACCAATGAAGGTAATCCTAACAACCATGTTCTTGCAGTTGAATTCGATATAGCTAAAAACTTAGAAGATTTCCACGATATAAATGACAATCATGTTGGTGTTGACATAAACTCGCTTATATCCTTAACTTCACATGAGGCTGGCTATTGGGGTGGGGAAAATGACAAGAAGTTTAATGTGTTGGACATAAAAAGCGGAGAAAATTATCAAGTATGGATTGAATTTATGCACTCCCAGCTAAACGTTACAATGGCCCGGGCAGGACAAAAGCGGCCTCATGTTCCTCTCATCAGTACGAATGTTAATCTTTCTGCGGTCCTTATGGATGAAACATACGTTGGATTCTGTGCATCCACAGGGCGATTAATAGACAGTAGTAAGATTCTTGCTTGGAGCTTTAGTAATACAAATTTTTCAATTGGTGATGCTTTAGTGACAGATAACTTGCCTTCATTTGTTCCTCATAAGGGATGGTTTTCTGGAGCAAAAGCTATAGCTGTAGAAGTCACTGGTGTTGTCTGTGTGTTAATCATCGGTTGTGGTTGTGTAGTGTTTTTCATCCTATATAGAGGGAAAATGGGAGAGGAAGAAATTGAAGAGTGGGAACTAGAGTATTGGCCACATAGGATTAGTTTCCAAGAGATTCATGCAGCAACAGGAGGATTCTCTGAAGAGAATATGGTTGATGTGAGAGGGAACAAAAGTGTATATAAAGGGATTTTGCAAGGAGTTGAAGTCGCGGTCAAGAGAATCCCTCAAGAAAGAGAAGGGATGAGAGAGTTTTTGGCCGAGGTTTCAAGCATAGGAAGATTGAAACACAGAAACTTAGTAGGATTCAGAGGTTGGTGCAAAAAAGAAAAACGGAACTTGGTTTTAGTTTATGACTTCATGAACAATGGAAGTTTGGACAAATGGATCTTTGAGTGCGAAGAAGGAAAGATGCTTACATGGGAAGAGAGGATTCAAGTTTTGAAAAATGTAGCCACAGGGATTCTATACCTGCATGAAGGTTGGGAGGTTAAGGTCTTGCATAGGGATATCAAAGCAAGCAATGTTCTACTTGACAAGGACATGAATGCTAGACTGGGTGATTTTGGTTTGGCTCTTATGCATGAGCATCACGGACAAGTGGCCAGCACAACAAAAGTACTCGGAACATTAGGATACATTGCTCCAGAAGTGATTCGGACAGGAAGAGCGTCAACTATGTCCGATGTGTTTGGGTTTGGAATATTGGTGTTGGAAGTAATATCCGGGCGAAGACCTATTGAAGAACATAAGCCAGGGTTAATTGAATGGGTGGAGTCTCTAATGGTGCTTGATCAATTGCACAATGCTGTTGATGAAAGGTTGAAGGCTAAAGGAGGATACTCCATTGTGGAAGTTGAGAGATTGCTTCATTTGGGTTTGTTGTGTTCAAATTCAGACCCTAGTGTTAGACCAACAATAAGGCAGGTTGTGAAAATGTTGGAGGGAGAAATGGATATCATAGAATCTGATGAAGAAAATATGGAGAGAAGTTTACTTGGAAGAATAAAATCAGCAGCAATGTGGTCTAGAACTGAAGAAATTAAAATGTTCAGTTATAATTCTAAGACATCTACAAGTTGCTCAAGTTCCATTCGGCCGTCAGATTCAGATATCATTAGGGAAGGCCGGTAA 2037 0.4026 MPHLKLLFILLHTLTIVSYVSPTEFVYNTNFNSKNIILFGNATIQSSILTLTNGSLFSIGRAFYPKKIPIKPPYSSTILPFATSFIFSVAPIKNSIAGHGLSFLFTPSRGVNGTTSAEFMGLFNLTNEGNPNNHVLAVEFDIAKNLEDFHDINDNHVGVDINSLISLTSHEAGYWGGENDKKFNVLDIKSGENYQVWIEFMHSQLNVTMARAGQKRPHVPLISTNVNLSAVLMDETYVGFCASTGRLIDSSKILAWSFSNTNFSIGDALVTDNLPSFVPHKGWFSGAKAIAVEVTGVVCVLIIGCGCVVFFILYRGKMGEEEIEEWELEYWPHRISFQEIHAATGGFSEENMVDVRGNKSVYKGILQGVEVAVKRIPQEREGMREFLAEVSSIGRLKHRNLVGFRGWCKKEKRNLVLVYDFMNNGSLDKWIFECEEGKMLTWEERIQVLKNVATGILYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLALMHEHHGQVASTTKVLGTLGYIAPEVIRTGRASTMSDVFGFGILVLEVISGRRPIEEHKPGLIEWVESLMVLDQLHNAVDERLKAKGGYSIVEVERLLHLGLLCSNSDPSVRPTIRQVVKMLEGEMDIIESDEENMERSLLGRIKSAAMWSRTEEIKMFSYNSKTSTSCSSSIRPSDSDIIREGR* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1153 678 Gene3D - 22 266 - -
Mal4g1153 678 PANTHER - 1 664 - -
Mal4g1153 678 SMART serkin_6 354 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1153 678 ProSiteProfiles Protein kinase domain profile. 347 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1153 678 SUPERFAMILY Protein kinase-like (PK-like) 325 616 IPR011009 -
Mal4g1153 678 Gene3D Transferase(Phosphotransferase) domain 1 422 637 - -
Mal4g1153 678 CDD lectin_legume_LecRK_Arcelin_ConA 23 261 IPR001220 GO:0030246
Mal4g1153 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 261 IPR013320 -
Mal4g1153 678 Pfam Protein kinase domain 360 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1153 678 CDD STKc_IRAK 357 617 - -
Mal4g1153 678 Coils Coil 612 632 - -
Mal4g1153 678 Pfam Legume lectin domain 24 262 IPR001220 GO:0030246
Mal4g1153 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Mal4g1153 678 MobiDBLite consensus disorder prediction 659 678 - -
Mal4g1153 678 PANTHER LECTIN RECEPTOR KINASE 1 664 - -
Mal4g1153 678 Gene3D Phosphorylase Kinase; domain 1 315 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1153 Mal-Chr4 16307135 16309171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1153 20 563 Receptor kinase-like Gene Family AT4G04960 56.600 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal4g1153 Pkinase 5.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1153 - - mtr:MTR_2g090410 1099.73