Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1151 ATGAAGCACCACCGTGTATCCGCCTTGTTTCTTTTAAGCCTATGTTTCATAGTTGCGCATGTACAATCTAAGGCTAAGCACAATTTCCACCTCGACACACATTGGTACCCAGGAACCGCCAGTTGGTACGGCGAGGCTGAGGGTGACGGTAGCTCAGGAGGGGCGTGTGGGTACGGTAGTTTGGTGGATGTGAAGCCGTTAAGGGCAAGAGTAGGGGCAGTGGGGCCACTGTTGTATAAGAAGGGAAGAGGTTGTGGAGAGTGTTATAAGGTCAAGTGTTTGGACCATAGCATATGCAACAAGAGGGCAGTGACAGTTATAATAACAGATGAGTGCCCTGGCTGCCCTTCTGACCGAACACATTTCGACCTCAGTGGTGCTGCTTTTGGTCACATGGCTGTTCATGGTGAGAATGGTCAACTTAGGAATAGAGGTGAAATCCCAGTTCTTTACAGAAGAACAACGTGCGTATATGCTGGCAAAAATATTGCTTTTCAAGTTAATGAAGGCTCCACACCATATTGGTTGTCACTTCTAGTGGAGTTTGAGGATGGAGATGGTGACATAAGCTCCATGCATATACAAGAGGCTGGGTCTAGTGAGTGGCTACAAATGAATCATTTATGGGGTGCAAATTGGAACATTATTGCGGGACCTTTGAGAGGACCTTTCTCTGTAAAACTAAGCACATCCACAGGAAAAAGCCTCACTGCTAGAGATGTGATTCCAAGTAATTGGTCTCCAAAATCCACTTATACCTCTCGCTTAAATTTCTCTCCTTAA 783 0.4598 MKHHRVSALFLLSLCFIVAHVQSKAKHNFHLDTHWYPGTASWYGEAEGDGSSGGACGYGSLVDVKPLRARVGAVGPLLYKKGRGCGECYKVKCLDHSICNKRAVTVIITDECPGCPSDRTHFDLSGAAFGHMAVHGENGQLRNRGEIPVLYRRTTCVYAGKNIAFQVNEGSTPYWLSLLVEFEDGDGDISSMHIQEAGSSEWLQMNHLWGANWNIIAGPLRGPFSVKLSTSTGKSLTARDVIPSNWSPKSTYTSRLNFSP* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1151 260 SUPERFAMILY Barwin-like endoglucanases 31 160 IPR036908 -
Mal4g1151 260 Gene3D - 18 156 IPR036908 -
Mal4g1151 260 Pfam Expansin C-terminal domain 163 243 IPR007117 -
Mal4g1151 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 174 254 IPR007117 -
Mal4g1151 260 PANTHER EXPANSIN-LIKE PROTEIN B1 14 260 - -
Mal4g1151 260 PANTHER EXPANSIN-B3 14 260 - -
Mal4g1151 260 SMART dpbb_1 71 151 IPR007112 -
Mal4g1151 260 PRINTS Expansin/Lol pI family signature 52 70 IPR007118 GO:0005576
Mal4g1151 260 PRINTS Expansin/Lol pI family signature 75 93 IPR007118 GO:0005576
Mal4g1151 260 PRINTS Expansin/Lol pI family signature 144 160 IPR007118 GO:0005576
Mal4g1151 260 PRINTS Expansin/Lol pI family signature 34 49 IPR007118 GO:0005576
Mal4g1151 260 PRINTS Expansin/Lol pI family signature 240 254 IPR007118 GO:0005576
Mal4g1151 260 PRINTS Expansin/Lol pI family signature 202 216 IPR007118 GO:0005576
Mal4g1151 260 Gene3D - 158 259 IPR036749 -
Mal4g1151 260 Pfam Lytic transglycolase 76 151 IPR009009 -
Mal4g1151 260 SUPERFAMILY PHL pollen allergen 161 254 IPR036749 -
Mal4g1151 260 PRINTS Major pollen allergen Lol pI signature 181 196 IPR005795 GO:0005576|GO:0019953
Mal4g1151 260 PRINTS Major pollen allergen Lol pI signature 133 148 IPR005795 GO:0005576|GO:0019953
Mal4g1151 260 PRINTS Major pollen allergen Lol pI signature 165 180 IPR005795 GO:0005576|GO:0019953
Mal4g1151 260 PRINTS Major pollen allergen Lol pI signature 230 247 IPR005795 GO:0005576|GO:0019953
Mal4g1151 260 PRINTS Major pollen allergen Lol pI signature 73 84 IPR005795 GO:0005576|GO:0019953
Mal4g1151 260 PRINTS Major pollen allergen Lol pI signature 111 126 IPR005795 GO:0005576|GO:0019953
Mal4g1151 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 53 161 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1151 Mal-Chr4 16259101 16301883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1151 9 196 Expansin Gene Family AT4G28250 64.062 1.97e-87 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1151 K20628 - gmx:100780112 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1151 4 16259101 16301883 Mal4g1151 4 16259101 16301883 ECH