Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1132 ATGGGTTGCATAAATTCCAAAAGTTCAGCTGTGGATGACAGCAATGAAGGTTTGACAAAGGATTTGGCATCATCTAGCAGAAGGAATTTTGTGAAGAATGTTTCGAGATCGGATACGAAGAAAAGGGTTGATGGAGTTTTGGAGAAAGATAAGTTATTGGATGGTATTGGCAGCATGAAAGTTGGATTGATTGACAAGGAAGTTAATGATGGTTCGGTGTGGTTGTATGATGATCAGAATGAGAAGAAGAAAATGGAGAAAGCTGGATTTGATGTTGTTGATTTTACGAGTCTCGGAGGAAGGGTTCCAAAGGCGTTAGAAGGTGAGCAAGTTGCAGCTGGATGGCCAACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCCGTGGGTGGATACCGCGGAGTGCAAGTACTTTTGAGAAGTATGATAAAATTGGCCAAGGAACTTACAGCACTGTTTTTAAGGCACGCGATTTGATTAGCCAAAAGATAGTTGCCTTGAAGCGGGTACGCTTCGATAATCTCGATCACGAGAGTGTCAAGTTTATGGCAAGGGAAATCGTTTTTCTGCGTAGGCTTGACCATCCAAATGTAATAAAGTTGGAGGGCTTGATAACATCAAAGACATCTCGCAGCTTGTACCTTGTTTTTGAATATATGGAACATGATCTTACAGGACTTGTATCAGCACCTGGTATCAAGTTTTCTGAACCACAGATTAAATGCTACATGAAGCAACTTCTTAGTGGATTGGATCATTGCCATAGTCGTGGTATCCTTCACCGTGATATAAAGGGCTCAAATCTTCTCATTGACAATAAGGGCATTTTAAAGATTGCAGATTTTGGTTTGGCAAATTTTTTTGACCCCAATCAAAGTGTTCCATTGACCAGCCGCGTAGTAACTCTGTGGTATAGACCACCAGAACTTTTACTTGGATCATCAAATTATGGAGTTGCAGTGGATATGTGGAGCACTGGTTGCATACTCGGTGAACTCTACTGTGGCAGGCCTATATTGCCTGGAAAAACAGAGGTTGAACAATTGCATAGGATTTTTAAACTTTGTGGATCACCATCTGTAGACTATTGGCGTAAACTGCGGCTGCCCCATTCTACAGTATTCAGGCCTCCTCACCATTATAGGAATTGTGTTAAAGATACATTTAAAGGAGTTCCATCTGCTGCTGTCAGGCTTATAGAGACCCTACTCTCTTTAGATCCTACACTTCGAGGAACCGCAGCTACAGCTCTGAAGGACGAGTTCTTTTCATTGGAACCCCGCGCTTGTGATCCATCAGCTTTGCCGAAATATCCTCCCACCAAAGAGATTGACGCTAAAATGCGGGAAGAATCAACAAGAAGGGAAGGAGCTCTTGGGGGAAAGGAACAAAAAGTTGGGCCACGAGTTAGACAAGAGAAAGAATCCCAGTCATGTGTTTTATCCAAAACCAATGCTGACTCTCGCATATCAATGCAGCAAGGGCAACGCTTTCCAAACATGTCAAGCCGGAATGAATCATTCAACCCTCACAGAGAGCCCGTATCTGGATTTATGGTTTTGCCACACAAACAGTCTGAAGATGTTAAAGAAACGGTTAATTATTTCTCTGGGCCTCTTTATCCAAGGCCTTCTTCACATTCAGGTTTACTGGTTCCAGGTTCGGGCCGGCACAAAGTTGGAAAAGAAGCCGGTGAGCGGCCTATTCATGTTTCAAATAAAGTCAATCTATCAAAATCATCTAGGACTTCGTTGTCTGGAAATCAAAAAGAAAATCCATCTCCTTGGAGGCCCCGAGATACAATTCAAGTACAACAATCTTTAGGTTTAAGTAATGGATCAGAGTCAAGAAGGCGACATGATAAAAAACGCCATTCTCAGATAGTCGATATCAGCCAAGCAGAAAATGGGAAGGACGGGCATGTATCCAGTGGAAACAATCTATATATGTCTGGTCCATTACTGGTTTCATCAAACAATATGGATGAGATGCTCAAAGAGCGCGATCGGAAATTCCAAGAATATTCAAGACGAGCCAGAGTTAAATAG 2046 0.4238 MGCINSKSSAVDDSNEGLTKDLASSSRRNFVKNVSRSDTKKRVDGVLEKDKLLDGIGSMKVGLIDKEVNDGSVWLYDDQNEKKKMEKAGFDVVDFTSLGGRVPKALEGEQVAAGWPTWLSSVAGEAIRGWIPRSASTFEKYDKIGQGTYSTVFKARDLISQKIVALKRVRFDNLDHESVKFMAREIVFLRRLDHPNVIKLEGLITSKTSRSLYLVFEYMEHDLTGLVSAPGIKFSEPQIKCYMKQLLSGLDHCHSRGILHRDIKGSNLLIDNKGILKIADFGLANFFDPNQSVPLTSRVVTLWYRPPELLLGSSNYGVAVDMWSTGCILGELYCGRPILPGKTEVEQLHRIFKLCGSPSVDYWRKLRLPHSTVFRPPHHYRNCVKDTFKGVPSAAVRLIETLLSLDPTLRGTAATALKDEFFSLEPRACDPSALPKYPPTKEIDAKMREESTRREGALGGKEQKVGPRVRQEKESQSCVLSKTNADSRISMQQGQRFPNMSSRNESFNPHREPVSGFMVLPHKQSEDVKETVNYFSGPLYPRPSSHSGLLVPGSGRHKVGKEAGERPIHVSNKVNLSKSSRTSLSGNQKENPSPWRPRDTIQVQQSLGLSNGSESRRRHDKKRHSQIVDISQAENGKDGHVSSGNNLYMSGPLLVSSNNMDEMLKERDRKFQEYSRRARVK* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1132 681 MobiDBLite consensus disorder prediction 1 22 - -
Mal4g1132 681 ProSiteProfiles Protein kinase domain profile. 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1132 681 PANTHER CYCLIN-DEPENDENT KINASE 1 678 - -
Mal4g1132 681 Gene3D Transferase(Phosphotransferase) domain 1 221 459 - -
Mal4g1132 681 MobiDBLite consensus disorder prediction 572 612 - -
Mal4g1132 681 Pfam Protein kinase domain 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1132 681 Gene3D Phosphorylase Kinase; domain 1 125 220 - -
Mal4g1132 681 MobiDBLite consensus disorder prediction 629 646 - -
Mal4g1132 681 PANTHER CELL DIVISION PROTEIN KINASE 1 678 - -
Mal4g1132 681 CDD STKc_CDK9_like 138 422 - -
Mal4g1132 681 MobiDBLite consensus disorder prediction 449 481 - -
Mal4g1132 681 SUPERFAMILY Protein kinase-like (PK-like) 132 423 IPR011009 -
Mal4g1132 681 MobiDBLite consensus disorder prediction 539 646 - -
Mal4g1132 681 MobiDBLite consensus disorder prediction 449 471 - -
Mal4g1132 681 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Mal4g1132 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Mal4g1132 681 SMART serkin_6 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1132 Mal-Chr4 15994641 15998662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1132 130 465 Core Cell Cycle Gene Families AT5G10270 47.159 2.04e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mal4g1132 Pkinase 4.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1132 - K08819 gmx:100775462 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1132 4 15994641 15998662 Mal4g1132 4 15994641 15998662 ECH