Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1127 ATGGATCATAATCAACAAGGAGGTCAAGCTTCTTCTTCAACCAAAGTGGAAAGAAAGATCGTTGAGAAAAATAGGAGAAACCAAATGAAGATCCTATTTTCCAAACTCAACTCACTTCTCCCTAACTATAATCCACAGGAATTAGCGTTACCATTACCTGATCAAGTAGACGAGGCTATAAACTACATAAAGAGCCTAGAGACAAATCTAAAGTTGGGAAAGGACAAGAAAGAAAGTTTAATGGGAAGGAAGAGATCACGTAGTGACTGTTCAAGTTCTTCTCAAGTATTAAAAGGAAGCATAATATCACCAAAAATTGAGATTCATGAAATGGGACCCTCTCTACAACTCATTGTAACATGCGGTGTTGATGACCACTTTATTTTCTGTGAAATAATTCGAATACTTCATGAAGAGAACGTTGAGGTTATTTCTGCAAATTCTTCCTTGGCTGGCGATTCAGTTCTTCATACTGTGCATGCTGAGATTCCGCAATCTTTGTTACAATTTGGAGCAACCAAAATAAGTGAGAGATTGAAAAGGTTTGTGAACGAATCTGCGAGCGAGGTGGAACCAGAGCCTCAATTGTGGGATCTTGAAATTGGAACTGAGAGTTGGGAGCTTCTACATTCTATAGTAACCAAGAGTTTACCTTGA 657 0.3836 MDHNQQGGQASSSTKVERKIVEKNRRNQMKILFSKLNSLLPNYNPQELALPLPDQVDEAINYIKSLETNLKLGKDKKESLMGRKRSRSDCSSSSQVLKGSIISPKIEIHEMGPSLQLIVTCGVDDHFIFCEIIRILHEENVEVISANSSLAGDSVLHTVHAEIPQSLLQFGATKISERLKRFVNESASEVEPEPQLWDLEIGTESWELLHSIVTKSLP* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1127 218 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 190 IPR015660 GO:0003700|GO:0006357
Mal4g1127 218 Gene3D - 7 97 IPR036638 GO:0046983
Mal4g1127 218 Pfam Helix-loop-helix DNA-binding domain 15 67 IPR011598 GO:0046983
Mal4g1127 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 83 IPR036638 GO:0046983
Mal4g1127 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 66 IPR011598 GO:0046983
Mal4g1127 218 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 9 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1127 Mal-Chr4 15940605 15941533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1127 8 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 40.541 1.10e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal4g1127 HLH 7.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1127 - - mtr:MTR_2g090425 309.301