Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1099 ATGCTAGCAGTGGCACCAATGAGTAGCATGGAGGAGAATTTATCAATTGGAACATGCGATTTTGCTGATCTCTCTGAAGGAAACTTATTGGAAAGCATTAATTTCGAATTCGACGATGATTTCTTTTTATGTATCGACGGAGATGTGTTGCCGGATCTTGAGATGGACCCGGAAATGCTTGCTGAATTCTCCCTCAGCGGCAGTGAGGAATCGGAGATGAATTCGGTGGTTACGGGTGCAAATAGCAAATCTTGTGATGATGGGAATATGGTTAGTATTGAGAGAAAATTACAAGATGAAGAGAAAGTAGTTTCTTCTTCAGATTCGGGTTCGAGCCGTGTGGAAGAGATAATTAGCAAAAGAGATGAATCCGTTGTGGTGAATCCATTGCCTAAAGAAGTTGAGAAAGGAAGAAAATCATCATCTCAATCAAAGAATAATCCTCATGGGAAGAGAAAAGTGAAGGTGGATTGGACCCCAGAATTGCACAGAAGATTCGTACAAGCAGTAGAGCAGCTAGGTGTGGATAAGGCTGTACCTTCAAGAATTTTAGAAATTATGGGAATTGACTGCCTCACCCGCCATAACATCGCCAGCCACCTTCAAAAATATCGATCACATAGGAAGCATTTGCTAGCACGTGAAGCTGAAGCAGCAAGCTGGAGTCAGCGGAGGCAAATGTTTGGAACAAGTAGAGGAAAAAGAGATATTGTGAATCATTGGGTTGCACCAACCATGGGTTTCCCTCCAATGTCACCAGTACACCATTTTAGACCTTTACATGTATGGGGGCACCATCCTATGGATCAGTCCTATATGCACATGTGGCCTAAATATTCGCCGCACCAACCGCCGGCTAATTGGGCACCTGTACGGCCGACTCCACCTCCTAATGCTTCGTACTGGCACCAACGACAGGCTCCAAATGCACCAACCGCAGGAACACCGTTCTTTCCACAGCCTCTGACAACAACGAGATTTGGCCCTCCAACTGTTCCGGGCATTCCACCACCCCATGCCATGTACCAAGTAGATCCCGCCGTTGTCGTCCCGGCCGGTCAACCATCTCCTCAGCCTCTATTAGACTTCCATCCGTCAAAGGAGAGCATAGACGCAGCTATAAGCGATGTATTATCAAAACCATATTTACCGTTGCCTCTTGGCCTTAAAGCTCCAGCAGTTGAAGGTGTAATGGGTGAATTACAGCGACAAGGAATTCCAAAAATTCCACCTTCTTGTGCTTGA 1245 0.4578 MLAVAPMSSMEENLSIGTCDFADLSEGNLLESINFEFDDDFFLCIDGDVLPDLEMDPEMLAEFSLSGSEESEMNSVVTGANSKSCDDGNMVSIERKLQDEEKVVSSSDSGSSRVEEIISKRDESVVVNPLPKEVEKGRKSSSQSKNNPHGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRQMFGTSRGKRDIVNHWVAPTMGFPPMSPVHHFRPLHVWGHHPMDQSYMHMWPKYSPHQPPANWAPVRPTPPPNASYWHQRQAPNAPTAGTPFFPQPLTTTRFGPPTVPGIPPPHAMYQVDPAVVVPAGQPSPQPLLDFHPSKESIDAAISDVLSKPYLPLPLGLKAPAVEGVMGELQRQGIPKIPPSCA* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1099 414 Pfam Myb-like DNA-binding domain 156 205 IPR001005 -
Mal4g1099 414 PANTHER TRANSCRIPTION ACTIVATOR GLK1 14 414 IPR044825 GO:0003700|GO:0045893
Mal4g1099 414 SUPERFAMILY Homeodomain-like 151 210 IPR009057 -
Mal4g1099 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 150 209 IPR017930 -
Mal4g1099 414 MobiDBLite consensus disorder prediction 128 154 - -
Mal4g1099 414 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 153 207 IPR006447 GO:0003677
Mal4g1099 414 MobiDBLite consensus disorder prediction 128 142 - -
Mal4g1099 414 Gene3D - 150 211 - -
Mal4g1099 414 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 14 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1099 Mal-Chr4 15412014 15416568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1099 1 320 G2-like Transcription Factor Family AT5G44190 40.166 1.92e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal4g1099 Myb_DNA-binding 5.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1099 - - gmx:100775671 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1099 4 15412014 15416568 Mal4g1099 4 15412014 15416568 ECH