Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1094 ATGCCTTTAGCTGGTATGGAAATAGGCAATTCACCTTTCACCTTTGTTCCAATAGCTGAAATTTGTAGTGGTTCATATGATTCAGACTACTTAGTTGATGTTCTTGGAATGTTGACCGGTGTTGGAACCGAAAGAGAGTATGAGAAGAATGGAACAAGCAGCAAACTCAATGTGATTTCTATTGAAGAGGATGGGAACAAACTTCAATGCACTCTTTTTGGTTCATATGTTGATGATCTGAACACATATTTGGCTTCTGGAGATACTGTTGATACTGTTGTGGCTATTCAGTTGGCGAAGGTGAAAACCTTCCAAGACAAAATACACATCAAGAATTGTATCAGTTGTACAAGGGTGGTGTTCAATCCAAATTGTGCTGAAGCTATTGCCCTTAAGAATAGGATGGTTGGTAATATTCAAACCCCGTCACCATTATCACTTGCTCAAATCCCTGCTGAACCAACTGTGGATCCTCTGCAAGATTTTCTGTACAACACTCAAAGGAGAACCATTCAAGGACTGAAGGATTGTCAAAAGGAGGGCATTTTTGTTGTTCTAGGAGCTGTAAAGCATATTGTGAACCCTGCTAATTGGTACTATACTGCTTGTATGTGCAATAAATCTGTGTATCCAGATTCTGGCATGTATTTCTGTGGCAAATGTAATAAACATGTGGTCAAAGTTTCACCTAGGTTCTCAATTAAGGTTCGTGTCATGGACGACACTGATTCTGCTACGTTTGTTTTATTTGATCGAGATGCATCAATGTTGTTCAACAAAAGTTGTGCTCAAATCTTGGCTTCCAATGGAGGTAATGATGGGGAAATCCCACCAGAAATTGCAGCTCTTATGAATTGTACATTCCTTTTTAAGGTGGAATTCAAGACACCTTTAAATCATAGGTTTGAACAGTCATTTAGAGTTAGGAAAGTTTGCACAGATGGGATTATTATCAACCAATTCAAGGCCAAGTGGGCTAAAGAAGAAACAACTTTCATAAAAAATGCCAATGAGCTTGGATCTTTGAGCTTTCTAATGGACAAGGGGAAAGGTGTCTTGGTTGATGGTTCAACCAATGTTATGACTTTGGTATAA 1095 0.3872 MPLAGMEIGNSPFTFVPIAEICSGSYDSDYLVDVLGMLTGVGTEREYEKNGTSSKLNVISIEEDGNKLQCTLFGSYVDDLNTYLASGDTVDTVVAIQLAKVKTFQDKIHIKNCISCTRVVFNPNCAEAIALKNRMVGNIQTPSPLSLAQIPAEPTVDPLQDFLYNTQRRTIQGLKDCQKEGIFVVLGAVKHIVNPANWYYTACMCNKSVYPDSGMYFCGKCNKHVVKVSPRFSIKVRVMDDTDSATFVLFDRDASMLFNKSCAQILASNGGNDGEIPPEIAALMNCTFLFKVEFKTPLNHRFEQSFRVRKVCTDGIIINQFKAKWAKEETTFIKNANELGSLSFLMDKGKGVLVDGSTNVMTLV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1094 364 Gene3D - 162 316 IPR012340 -
Mal4g1094 364 SUPERFAMILY Nucleic acid-binding proteins 167 319 IPR012340 -
Mal4g1094 364 Pfam Replication factor-A C terminal domain 185 296 IPR013955 -
Mal4g1094 364 PANTHER REPLICATION FACTOR A 1, RFA1 11 269 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal4g1094 364 SUPERFAMILY Nucleic acid-binding proteins 13 135 IPR012340 -
Mal4g1094 364 CDD RPA1_DBD_B_like 33 135 - -
Mal4g1094 364 CDD RPA1_DBD_C 178 311 IPR013955 -
Mal4g1094 364 Gene3D - 7 141 IPR012340 -
Mal4g1094 364 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 11 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1094 Mal-Chr4 15384691 15386593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1094 6 292 Core DNA Replication Machinery Family AT5G61000 23.920 2.40e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1094 - - mtr:MTR_4g036240 536.954