Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1081 ATGGACATTGGAGAAATTTCAAATGGGTTTCTTCATGAAAACACAACTAGTTCATCAAATGAAAATCCTCCTATTTTAAAGAGAAAAAGAAACCTCCCTGGAAATCCAGATCCTGAAGCAGAAGTGATATCCTTATCACCAAAAACACTGATGGCAACAAACAGATTCGTGTGTGAAATTTGTCTAAAAGGTTTTCAAAGGGATCAAAATCTTCAACTTCATCGACGTGGACATAACCTTCCTTGGAAGCTGAAGCAAAGAACAAGCAAAGAAATAAGGAAGAGAGTGTATGTGTGTCCAGAGAAGACTTGTGTTCACAATCATCCTTCAAGAGCTTTGGGAGACTTAACTGGGATAAAGAAGCACTTTTGTAGGAAGCACGGTGAGAAGAAGTGGAAGTGTGAAAAGTGCTCAAAGTTTTATGCTGTTCAATCGGATTGGAAAGCACACTCAAAAACTTGTGGTACCAGAGAATACAAATGTGACTGTGGTACTATATTTTCAAGGAGGGATAGCTTTGTCACTCACAGGGCATTCTGTGATGCCTTAGCAGAAGAAACAGCTAGAATAAACGGATCAACAAACATCACCAACTCATTATTAGGAATGGGAAGTAACAACATTGGTAACTACAACATCTTGCAAAATTCTCTTTTCCCAAACATAGGAGGAACTCATTTTTCTTCAATTTTGAAGCCAATTTCATCCACACATCAAGAAACAAATAATCAAACATCAAGATCAGGTCTATCCCTTTGGATGTCTCAAACATCTCATGACACAATATTGGCTACTAATAGCAATTTGCATGAGATTCATCAACTTGAAAACCCACCACACTCTAATTATCATCAGAATTGGGTGTTTGGAAATAAATTATCTTCCAATATTGGATCTCAAGAGTTAACTAGTTCTGTTTCACTTCCACTAGTCAATAACAACATTGATAAGGATAGTGCAAATGCAAACAACCTTGTCAGTGTTCCTTCCTTGTATAGCTCACAACATCAGTCTCATCATCAAACAACCTCTGCAAACATGTCAGCAACAGCTTTGTTGCAAAAAGCTGCTCAAATTGGGACAACTTCAACTGATTCATTTTTCCTTGGAAGTTTAGGTTTGAAATGCAATAGTCCAAGTCAAGATCTTGGGAATAAATTTTGTGGGGTGTACGGTTCAAGTTCAATACTCACAACAAGTGACATTGGGACAGTAGAGAACTATATTTCAGGTGAATTGTCACAAATGCCCCCCACAAAACGACGGCGCGTGCAGAATGAAGAGAGTGTGTGGGGACAAACTAGGGATTTTCTTGGTGTTGGTGGTGCTAACCATTTGCCACAGTTTATCAATCAACGGATGGATTTGATTTGA 1374 0.3836 MDIGEISNGFLHENTTSSSNENPPILKRKRNLPGNPDPEAEVISLSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFVTHRAFCDALAEETARINGSTNITNSLLGMGSNNIGNYNILQNSLFPNIGGTHFSSILKPISSTHQETNNQTSRSGLSLWMSQTSHDTILATNSNLHEIHQLENPPHSNYHQNWVFGNKLSSNIGSQELTSSVSLPLVNNNIDKDSANANNLVSVPSLYSSQHQSHHQTTSANMSATALLQKAAQIGTTSTDSFFLGSLGLKCNSPSQDLGNKFCGVYGSSSILTTSDIGTVENYISGELSQMPPTKRRRVQNEESVWGQTRDFLGVGGANHLPQFINQRMDLI* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1081 457 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Mal4g1081 457 Gene3D Classic Zinc Finger 89 180 - -
Mal4g1081 457 SUPERFAMILY beta-beta-alpha zinc fingers 55 152 IPR036236 -
Mal4g1081 457 MobiDBLite consensus disorder prediction 1 38 - -
Mal4g1081 457 MobiDBLite consensus disorder prediction 9 25 - -
Mal4g1081 457 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 78 IPR013087 -
Mal4g1081 457 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 456 - -
Mal4g1081 457 PANTHER F-BOX ASSOCIATED PROTEIN 20 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1081 Mal-Chr4 15078458 15081544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1081 22 441 IDZ Gene Family AT1G03840 53.797 2.99e-142 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal4g1081 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1081 K25870 - gmx:100778666 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1081 4 15078458 15081544 Mal4g1081 4 15078458 15081544 ECH