Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1071 ATGTTCGCTATTCTCCGGAGAGCAGCCAGCGGCGAACCGAGACTCACCGCCGCTCAAGCTAACACCCAATCAACAGAACCACCCAACACTGGTCTCGACCCTAAGCTCATCACTACTCTACCCACTTTCCTCTTCAAACAAAAGCAACAAGAAAACAACCATATTTCCAATAATATTGTTGAATGTGCAGTGTGTTTGAGTTTATTGCACGATGAAGAAATGATGAGGTTGCTTCCCAATTGTAAGCATAGTTTTCATGTGGGTTGTATTGACAAGTGGTTAGCTTCGCATTTCACGTATCCAATTTGTCGAATCAAGGTTGAACCGCGGGTTGAACCAGAGCCACGTGAGGGTCCCATTTTGTTTGAAGCACCATCCGAAGGTACATCAGATGGTGGTAGTGGTGTTAGTAGGTCCCCCAAAGATATTTCGCGATTGAGCTTTTTTCGGAACGTTCTTACTAGCGATAGTTCTTTAAGATGA 483 0.4472 MFAILRRAASGEPRLTAAQANTQSTEPPNTGLDPKLITTLPTFLFKQKQQENNHISNNIVECAVCLSLLHDEEMMRLLPNCKHSFHVGCIDKWLASHFTYPICRIKVEPRVEPEPREGPILFEAPSEGTSDGGSGVSRSPKDISRLSFFRNVLTSDSSLR* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1071 160 MobiDBLite consensus disorder prediction 15 33 - -
Mal4g1071 160 PANTHER RING FINGER DOMAIN-CONTAINING 15 128 - -
Mal4g1071 160 SUPERFAMILY RING/U-box 37 111 - -
Mal4g1071 160 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 15 128 - -
Mal4g1071 160 ProSiteProfiles Zinc finger RING-type profile. 62 104 IPR001841 -
Mal4g1071 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 111 IPR013083 -
Mal4g1071 160 MobiDBLite consensus disorder prediction 115 141 - -
Mal4g1071 160 Pfam Ring finger domain 61 104 IPR001841 -
Mal4g1071 160 MobiDBLite consensus disorder prediction 8 33 - -
Mal4g1071 160 SMART ring_2 62 103 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1071 Mal-Chr4 14968810 14969292 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1071 2 158 C3H Transcription Factor Family AT2G42350 40.606 6.32e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1071 K19038 - rcu:8264225 146.747