Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1067 ATGAGTAACTTCAATGATGATCGTAACCATGATGATCATAATGATTATCCATTCGGCAATTTCTATCGTGGATCAAGTCAAAACAACTTCAACAAAAAAATTTTGTTAACCGCAATAGTTTCTTTAGCACTAGTATTGATTTTGGTCTTTGCTCTTCACCTCTACGCCAGGTATGTTCTCAAACGTCAAGCTCGCCGGAGAGCCGCCATTCACCAACTCAGTCTCACCGTTGCTCAAGCTCACACTCAATTCGCCGAACCACCCAACCCCGGAATCGACCCTACAATCGTCGCCACTCTTCCCACTTTTTTGTTCAAAGGAAAACAACAAGAAGAACAAGACAACCATGTTTCCAATAATATTGTTGAATGTGCCGTGTGTTTGAGTGTTGTAGAAGATGGAGAAATGATGAGGTTGCTTCCAAATTGTAAGCATAGTTTCCACGTGGGTTGTATCGATAAGTGGTTAGCTTCGCATTCTACATGTCCAATTTGTCGAACCAAGGTTGAACCACGGCTTGAACCAGAGCCACGTGAGAGTCCCACTTTGTTTGTACCACCCTCCGAAGGTACATCAGATGGTGGTAGTGGTGTTAGTGGGTCCCCCAAAAATATTTCAAGGTTGAGCTCTTTTCGGAGGATTCTTACTCGAGATAGATCTTCAAGAAGAATCCAACCTTCTAGCACTCCTCGTGATGATATTATTATTGATCGTGATTTAGAGAGGCAGTGA 732 0.4276 MSNFNDDRNHDDHNDYPFGNFYRGSSQNNFNKKILLTAIVSLALVLILVFALHLYARYVLKRQARRRAAIHQLSLTVAQAHTQFAEPPNPGIDPTIVATLPTFLFKGKQQEEQDNHVSNNIVECAVCLSVVEDGEMMRLLPNCKHSFHVGCIDKWLASHSTCPICRTKVEPRLEPEPRESPTLFVPPSEGTSDGGSGVSGSPKNISRLSSFRRILTRDRSSRRIQPSSTPRDDIIIDRDLERQ* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1067 243 ProSiteProfiles Zinc finger RING-type profile. 124 166 IPR001841 -
Mal4g1067 243 MobiDBLite consensus disorder prediction 185 211 - -
Mal4g1067 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 172 IPR013083 -
Mal4g1067 243 PANTHER RING FINGER DOMAIN-CONTAINING 28 243 - -
Mal4g1067 243 SMART ring_2 124 165 IPR001841 -
Mal4g1067 243 MobiDBLite consensus disorder prediction 212 243 - -
Mal4g1067 243 MobiDBLite consensus disorder prediction 173 243 - -
Mal4g1067 243 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 28 243 - -
Mal4g1067 243 SUPERFAMILY RING/U-box 123 177 - -
Mal4g1067 243 CDD RING-H2_PA-TM-RING 123 166 - -
Mal4g1067 243 Pfam Ring finger domain 123 166 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1067 Mal-Chr4 14909130 14909861 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1067 5 243 C3H Transcription Factor Family AT2G42360 42.745 2.31e-55 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1067 4 14909130 14909861 Mal4g1067 4 14909130 14909861 ECH