Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1066 ATGGGAATGAAGAGCACAGGAGGAGAAATAGTTCAAGTTCAAGGAGGCCACATTGTTAGAGCAACAGGTAGAAAAGATAGACACAGTAAGGTATACACTGCGAAAGGTCCTCGCGATCGACGTGTTCGCCTATCAGCACATACAGCAATTCAATTCTATGATGTTCAAGATCGTCTCGGCTACGACAGACCGAGTAAAGCTGTTGATTGGCTTATCAAAAAGGCTAAGTCTGCCATTGACAAACTTGATCAGCTTCCACCATGGAATCCAATTCCAAATGCAACAGAAGAGTTACAAGAGGAAGAGAATCATAATAATAATGCAGTTGAAACAAATGAAATGGTTATTGCAGCAGAACAATCAGAATCTTCTGGTTACAATTTGCAGCAGAACAATCACCATAACCATAACCATAACCATTCAGGTTTCATTCAATCAACTATTGATAATGATGCTATAGCATTTTTTCCAACAACTTCTGTTACTGAATCTATGAATTTTCAAAGTTACCCTTCTGATATAATCTCAAGAACAAACAACTCAACACAGGATCTTGGTCTTTCTCTTCATTCATTCCAAGACAATTCAGCTTCAAATGACCAAACACTTTTCTCTGGATCAAACCCTGTTGGATTTGATGCTAACTATAACAGGATTGTGAATTGGAACACAGCTGATATGAATAGAACCGGGTTTATGGTTAATTCGCCTGCGTTTCTAGGCCAAGGTTCGGCTTTTTCCGCCCATAGGGGGACCCTTCAGTCCAGTTTTTCGCCATCACTTCGTCCTTGGAATGATATTCCAATGGCGGATTCTTCGGTGGATCATCATAATCACAAGTCTCAACAACAAATTCACCAAGCTTCTATCTTTGGTAGCAGGTTTCTGTCTGATGCTTTGACAGGTTTCTGTATTCCTGCAAGAATTCAAGGTGAGGATGAGAGCCATGGAGGTGGTTCAGAAAGGCCATCCTCTTCTTCTAATTCTCATCATTAA 996 0.4036 MGMKSTGGEIVQVQGGHIVRATGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLDQLPPWNPIPNATEELQEEENHNNNAVETNEMVIAAEQSESSGYNLQQNNHHNHNHNHSGFIQSTIDNDAIAFFPTTSVTESMNFQSYPSDIISRTNNSTQDLGLSLHSFQDNSASNDQTLFSGSNPVGFDANYNRIVNWNTADMNRTGFMVNSPAFLGQGSAFSAHRGTLQSSFSPSLRPWNDIPMADSSVDHHNHKSQQQIHQASIFGSRFLSDALTGFCIPARIQGEDESHGGGSERPSSSSNSHH* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1066 331 Coils Coil 91 111 - -
Mal4g1066 331 Pfam TCP family transcription factor 23 137 IPR017887 -
Mal4g1066 331 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 331 IPR005333 GO:0003700
Mal4g1066 331 PANTHER TRANSCRIPTION FACTOR TCP4 2 331 - -
Mal4g1066 331 MobiDBLite consensus disorder prediction 310 331 - -
Mal4g1066 331 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1066 Mal-Chr4 14902643 14903638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1066 8 328 TCP Transcription Factor Family AT3G15030 41.058 3.52e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal4g1066 TCP 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1066 - - gmx:100814907 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1066 4 14902643 14903638 Mal4g1508 4 23219549 23220454 ECH
Mal4g1066 4 14902643 14903638 Mal4g1066 4 14902643 14903638 ECH