Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1027 ATGATGTTATCAGCTTCACCATCTTCTCTAGCAAGAAGTTCCTTAGAAGAGATGCTTGATTCGCTACGCCGGCGAGATGAAGAGGAGAAGCCTAAAGACCTACCGCCGGCATTGCCAGCAAGGCCGACGTCGAGAGGCCGGTTGCCGCCGGCGAGAAGGTCTTTGCCTAAAAGCTTTAAGGTTGATGGTGAAAATGGAAAGGGAATGGGACATAGAAGGAAAGGAAGTTTTGGGAATAAGAAGTTGATTTTGGATTTGGAATCTCCTTATGTGGTTATTTCAGAAGAGAATAGTGTTATTAGTGAGCAATCTTCACCTGCTCCTGTTTCTTCAATTCCTGTTGATGATTCTTTTGTTGCTCCACCTTCTCCGGTATTGGAAGATGACAATGTTTCTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAGAGGGAAGTGGGGACTCGGAAGAATACAGTCAACTTCGGGAGAACAAGCATCTGTTTCACTCTCAGATGGAAATGTTATGAAAGTGGCACGAACAGATCTCTTACCAGCTAATCCTGATATTTTAGAGGGTGTGGATGATCTTATACAGCTCAGCTACCTGAACGAGCCCTCGGTTCTTCACAATCTTCGGTTTAGATATTCTCAAGATATGATTTATAGTAAAGCTGGGCCAATTTTAATTGCTCTCAATCCCTTCAAAGATTTACAGATTTACGGAAACGATTATGTCTCTGCTTATAGGAAGAAATCTCTTGATAGTCCTCACGTTTTCGCCATGGTAGATGCAGCTTATAATGAAATGATAGGAGATGAAGTAAATCAATCCATTATCATAAGTGGCGAGAGTGGTGCTGGGAAAACAGAAACAGCAAAAATTGCGATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTGTGGGATAGAAAATGAAGTTCTTCAGACAAATGTTATACTAGAAGCTTTTGGCAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGTGCAACGGGAAAAATGTGTGGGGCTAAAATTCAAACCTTTCTATTGGAAAAGTCAAGAGTTGTTCAACTGGCTGATGGCGAGAGGTCTTATCACATATTTTATCAACTTTGTGCTGGATCTTCACCTCATCTTAAAGAGAGACTAAATCTTAGAGCGGCCAGCGATTATAAATATCTTAATCAGAGTGACTGCATGACAATTGATGGTGTCGACGACGCTAAAAAGTTTCATAGGCTGAGGAAAGCATTGGATGTCGTTCAAATGTGCAAAGAGGATCAAGAGCGGGTCTTTAAGATGCTCGCTGCAATATTATGGCTGGGAAATATATCATTCCAAGTTAATGATAATGAAAATCACATTGAAGTGGTGAACGATGAAGCTGTAATCAGTGCTGCGTCGCTGATGGGTTGCAGTTCTCAGGGACTAATGACAGTATTATCGACTCATAAAATTCAAGCTGGCAAGGATACTATCACCAAAACATTGACATTGCGGCAGGCAATTGATGCAAGAGATGCGTTAGCAAAATTTATCTATGCTAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTTGGTAAACGACGTACTGGGAGATCCATAAGTATCCTTGATATTTACGGGTTTGAGTCATTCGAGAAAAACAGCTTTGAACAACTTTGTATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTTTTTAAACTGGAGCAACAGGACTACGAAGTAGATGGTGTTGACTGGACCAAAGTAGATTTTGAGGACAATCAAGAGTGTTTGGATCTCTTTGAGAAGAAGCCTATAGGGCTACTCTCTCTGTTGGACGAGGAATCAAATTTTCCAAGGGCCACTGATCTAACACTTGCCAACAAACTTAGGCAGCACCTGCAAGCTAATCCCCGCTTTAAAGGGGAATGGGGAAAGGGTTTCAGTGTTTGTCATTATGCAGGAGAGGTTGTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGATCCAATGCCTTCTGATTCCATTCAACTACTATCATCATGTAGTTGTGAACTGCTGCAGTCGTTCTCCAAGACGCTTAACCAGTCTCAGAAGCAATCAAATTCTCAGCATGTAGGTGCTTTTGATTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAGTTGATGCATCAGTTGGAGAGCACGACGCCTCACTTTATTCGATGTATAAAGCCAAATGCAAAGCAACTTCCTGGCATATATGATGAAGATCTTGTTCTCCAGCAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCAAGAGCCGGATATCCTACTCGAGTTACACATCAAGAGTTCGCCAGAAGGTATGGGTTTTTGCTCTATGAGGCCAACACATCTCAAGATCCGTTAAGTGTCTCGGTTGCGGTTTTGCAACAATTTAATATCCCTCCTGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACAGGGCAGGTTGGTGCACTGGAGGATAAGAGAAAACAGGTTTTGCAGAGAATACTCGAGATTCAAAAATCCGTTCGTGGTCATCAAGCTCGCAGTCATTACAATAAACTTAAGAATGGAGTGACAACTTTACAATCATTTGTCCGCGGAGAAATTGCGAGAAGGAAATATGGTGTTATGGTGAAGTCTTCTATAACTATTTCTTCTGAAAATATTGAGGAGATAGAGGCTATCATACTACTACAATCTGTAATTCGTGGTTGGTTGGTTCGGAGGCATAATAGTAGCTTGAATAAGTTCAAGAGACATCCCGAGAATGGAAAATCTAGGCGAAGATCACATTCGAAGTTGTCAGACGACAAGGATGCATCGAAAGATCGGGGTCAAAATCTGCCTTCGGCTTTAGCAGAACTCCAAAGGCGGGTTGTGAAGGCCGAAGCAACTATAGAGCAAAAAGAAGAGGAAAATACCGAGTTGAAGGAACAGCTAAAACAATTTGAGAAAAGGTGGATTGAATACGAGAAAAGGATGAAAACAATGGAGGAAATGTGGCAAAGACAAATGTCATCTTTGCAATTGAGTCTTGCTGCTGCTAGAAGCAGCCTTGCTTCTGAGAATGCCAATGGTCAACCTTCAAGACATGATGTTGCATCACCATCACCTTTCTGTTATGATTCCGAGGATGCTACATCAATGGGATCTCGAACACCTCGAACACCCGGTTGCAGCACACCTTTGAAGTATTCTAGCAGTCTTTCCGAAGTCAAAGCAATGAGAGATGGTAACGGTACTTTGGGCAATCTGATGAAGGAGTTCGAGCAGCGCAGTCAGACATTTGATGAAGATGCAAGGGCTTTGGTCGAGGTTAGATCAACAGGGCAATCTGCGAATCCGAATTCCATTGAAGAACTGCGGAAACTCAAACACAGGTTTGAAGGGTGGAAGAAAGAATACAAGATGCGATTAAGGGAAACGAAAGCAAGACTTAAATTACGGAATTCAGAAATGGAAAAAAGTCGGCGGAGATGGTGGGGGAAATTGAGTTCTAGAGCACAATAA 3600 0.4175 MMLSASPSSLARSSLEEMLDSLRRRDEEEKPKDLPPALPARPTSRGRLPPARRSLPKSFKVDGENGKGMGHRRKGSFGNKKLILDLESPYVVISEENSVISEQSSPAPVSSIPVDDSFVAPPSPVLEDDNVSYFIKKKLHVWCRQPRGKWGLGRIQSTSGEQASVSLSDGNVMKVARTDLLPANPDILEGVDDLIQLSYLNEPSVLHNLRFRYSQDMIYSKAGPILIALNPFKDLQIYGNDYVSAYRKKSLDSPHVFAMVDAAYNEMIGDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSCGIENEVLQTNVILEAFGNAKTSRNDNSSRFGKLIEIHFSATGKMCGAKIQTFLLEKSRVVQLADGERSYHIFYQLCAGSSPHLKERLNLRAASDYKYLNQSDCMTIDGVDDAKKFHRLRKALDVVQMCKEDQERVFKMLAAILWLGNISFQVNDNENHIEVVNDEAVISAASLMGCSSQGLMTVLSTHKIQAGKDTITKTLTLRQAIDARDALAKFIYASLFDWLVEQVNKSLEVGKRRTGRSISILDIYGFESFEKNSFEQLCINYANERLQQHFNRHLFKLEQQDYEVDGVDWTKVDFEDNQECLDLFEKKPIGLLSLLDEESNFPRATDLTLANKLRQHLQANPRFKGEWGKGFSVCHYAGEVVYDTNGFLEKNRDPMPSDSIQLLSSCSCELLQSFSKTLNQSQKQSNSQHVGAFDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNAKQLPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRVTHQEFARRYGFLLYEANTSQDPLSVSVAVLQQFNIPPEMYQVGFTKLYLRTGQVGALEDKRKQVLQRILEIQKSVRGHQARSHYNKLKNGVTTLQSFVRGEIARRKYGVMVKSSITISSENIEEIEAIILLQSVIRGWLVRRHNSSLNKFKRHPENGKSRRRSHSKLSDDKDASKDRGQNLPSALAELQRRVVKAEATIEQKEEENTELKEQLKQFEKRWIEYEKRMKTMEEMWQRQMSSLQLSLAAARSSLASENANGQPSRHDVASPSPFCYDSEDATSMGSRTPRTPGCSTPLKYSSSLSEVKAMRDGNGTLGNLMKEFEQRSQTFDEDARALVEVRSTGQSANPNSIEELRKLKHRFEGWKKEYKMRLRETKARLKLRNSEMEKSRRRWWGKLSSRAQ* 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1027 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 910 IPR027417 -
Mal4g1027 1199 Pfam IQ calmodulin-binding motif 923 940 IPR000048 GO:0005515
Mal4g1027 1199 Pfam IQ calmodulin-binding motif 867 881 IPR000048 GO:0005515
Mal4g1027 1199 Pfam IQ calmodulin-binding motif 888 904 IPR000048 GO:0005515
Mal4g1027 1199 Coils Coil 1166 1186 - -
Mal4g1027 1199 PRINTS Myosin heavy chain signature 219 238 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g1027 1199 PRINTS Myosin heavy chain signature 273 298 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g1027 1199 PRINTS Myosin heavy chain signature 548 576 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g1027 1199 PRINTS Myosin heavy chain signature 601 629 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g1027 1199 PRINTS Myosin heavy chain signature 316 343 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g1027 1199 Gene3D - 372 428 - -
Mal4g1027 1199 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 136 185 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mal4g1027 1199 PANTHER MYOSIN 122 1197 - -
Mal4g1027 1199 MobiDBLite consensus disorder prediction 1179 1199 - -
Mal4g1027 1199 ProSiteProfiles IQ motif profile. 863 890 IPR000048 GO:0005515
Mal4g1027 1199 Pfam Myosin head (motor domain) 191 847 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g1027 1199 SMART MYSc_2a 183 860 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g1027 1199 Coils Coil 982 1030 - -
Mal4g1027 1199 Gene3D - 863 911 - -
Mal4g1027 1199 ProSiteProfiles Myosin motor domain profile. 189 859 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g1027 1199 PANTHER MYOSIN-2 ISOFORM X1 122 1197 - -
Mal4g1027 1199 MobiDBLite consensus disorder prediction 1 15 - -
Mal4g1027 1199 Gene3D Myosin VI head, motor domain, U50 subdomain 429 537 - -
Mal4g1027 1199 Gene3D - 560 749 - -
Mal4g1027 1199 Gene3D Kinesin motor domain 188 792 IPR036961 -
Mal4g1027 1199 SMART iq_5 920 942 IPR000048 GO:0005515
Mal4g1027 1199 SMART iq_5 883 905 IPR000048 GO:0005515
Mal4g1027 1199 SMART iq_5 860 882 IPR000048 GO:0005515
Mal4g1027 1199 MobiDBLite consensus disorder prediction 57 71 - -
Mal4g1027 1199 MobiDBLite consensus disorder prediction 1 75 - -
Mal4g1027 1199 ProSiteProfiles IQ motif profile. 921 950 IPR000048 GO:0005515
Mal4g1027 1199 MobiDBLite consensus disorder prediction 958 974 - -
Mal4g1027 1199 ProSiteProfiles IQ motif profile. 884 913 IPR000048 GO:0005515
Mal4g1027 1199 MobiDBLite consensus disorder prediction 946 984 - -
Mal4g1027 1199 MobiDBLite consensus disorder prediction 1071 1095 - -
Mal4g1027 1199 MobiDBLite consensus disorder prediction 17 35 - -
Mal4g1027 1199 MobiDBLite consensus disorder prediction 1049 1095 - -
Mal4g1027 1199 CDD MYSc_Myo8 203 847 IPR036022 -
Mal4g1027 1199 Gene3D - 793 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1027 Mal-Chr4 14219077 14229436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1027 1 1193 Myosins gene family AT5G54280 62.217 0.0 1539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1027 K10357 - gmx:100819335 1892.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1027 4 14219077 14229436 Mal4g1027 4 14219077 14229436 ECH